Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30182
         (625 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I650 Cluster: Putative uncharacterized protein PFB097...    34   2.4  
UniRef50_A1REG9 Cluster: Putative uncharacterized protein; n=11;...    33   4.2  
UniRef50_Q4XE98 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  
UniRef50_Q04956 Cluster: Probable cation-transporting ATPase 1; ...    32   9.7  

>UniRef50_Q8I650 Cluster: Putative uncharacterized protein PFB0973c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0973c - Plasmodium falciparum
           (isolate 3D7)
          Length = 64

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +1

Query: 355 KNELIINLQMRPFKKNNVLTNTYRFSRFILRKRNVYIYYLLYMIERNNVKCNEIIMNLIN 534
           KN  +I L  +    N++ T    F    +R    YI  ++YM E+NNV C++ ++N  N
Sbjct: 7   KNFPLIILDQKNIPHNDITTKNNGFQTKNIR---TYISTVIYMDEKNNVTCDDHLVNFYN 63


>UniRef50_A1REG9 Cluster: Putative uncharacterized protein; n=11;
           Shewanella|Rep: Putative uncharacterized protein -
           Shewanella sp. (strain W3-18-1)
          Length = 154

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = -2

Query: 447 SQNEPRKPVCISQDIIFFKWSHLKIYN*FIFLRGYITFLVIIVYFHCIIICTVP 286
           S+N  RK  CI   ++F     + +Y    F+RG++  +++++   C++   VP
Sbjct: 11  SRNPSRKSFCIYAVLLFLTEVLIALYAPAGFIRGFVGDVLVVILLFCMVRAVVP 64


>UniRef50_Q4XE98 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 65

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
 Frame = -2

Query: 345 YITFLVIIVYFHCII--ICTVPRTSFNVY*HF--VK*YVFMNCIL 223
           Y+ FLV ++YF CI   +C VP   + ++ ++   + Y F+NC++
Sbjct: 10  YVMFLVSVIYFVCICSHVCFVPFIIYILFIYYKTFEYYSFLNCLI 54


>UniRef50_Q04956 Cluster: Probable cation-transporting ATPase 1;
           n=3; Plasmodium|Rep: Probable cation-transporting ATPase
           1 - Plasmodium falciparum
          Length = 1956

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 15/63 (23%), Positives = 34/63 (53%)
 Frame = +1

Query: 355 KNELIINLQMRPFKKNNVLTNTYRFSRFILRKRNVYIYYLLYMIERNNVKCNEIIMNLIN 534
           K +++ N+     K+ N++ ++Y+F   ++      ++ LLY+   NN   N II+  ++
Sbjct: 386 KGKIVNNILYHKKKELNLINDSYKFLIILIIYALFSVFILLYITLSNNEYTNHIIIKCLD 445

Query: 535 QVT 543
            +T
Sbjct: 446 IIT 448


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,646,985
Number of Sequences: 1657284
Number of extensions: 9402189
Number of successful extensions: 19033
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19023
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)