Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30180X
(360 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 1.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 3.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 3.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 3.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 3.8
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 5.1
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 5.1
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 5.1
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 20 6.7
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 20 6.7
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 1.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 25 YHINLKFYSWITSVAGRRKLV 87
++ N + WI A RRKLV
Sbjct: 2042 FNTNFTIHYWIEKGADRRKLV 2062
Score = 21.0 bits (42), Expect = 3.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 19 LIYHINLKFYSWITSVAGRRKLV 87
+ Y+ N WI+ RRK+V
Sbjct: 1615 VFYNANFSINYWISEGVPRRKIV 1637
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 89 RGK*WLQDNCGYNFSGGSSEIKH 157
RGK + DN ++ SSE +H
Sbjct: 809 RGKALMDDNVMKKYTTSSSEARH 831
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 89 RGK*WLQDNCGYNFSGGSSEIKH 157
RGK + DN ++ SSE +H
Sbjct: 809 RGKALMDDNVMKKYTTSSSEARH 831
Score = 19.8 bits (39), Expect = 8.8
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -2
Query: 149 FLMSLRKNYTH 117
FL++L+K+Y H
Sbjct: 1284 FLLTLKKDYLH 1294
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 89 RGK*WLQDNCGYNFSGGSSEIKH 157
RGK + DN ++ SSE +H
Sbjct: 809 RGKALMDDNVMKKYTTSSSEARH 831
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 89 RGK*WLQDNCGYNFSGGSSEIKH 157
RGK + DN ++ SSE +H
Sbjct: 809 RGKALMDDNVMKKYTTSSSEARH 831
Score = 19.8 bits (39), Expect = 8.8
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -2
Query: 149 FLMSLRKNYTH 117
FL++L+K+Y H
Sbjct: 1284 FLLTLKKDYLH 1294
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -2
Query: 344 SFVHYKLDQTNNIEVVISHHPRLP 273
S ++YK NN+ V + H P
Sbjct: 370 SGINYKDTNDNNVSAVTTQHQGYP 393
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 20.6 bits (41), Expect = 5.1
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 119 GYNFSGGSSEIKH 157
GY++SG E+ H
Sbjct: 392 GYHYSGDGGEVAH 404
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 20.6 bits (41), Expect = 5.1
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 119 GYNFSGGSSEIKH 157
GY++SG E+ H
Sbjct: 340 GYHYSGDGGEVAH 352
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 20.2 bits (40), Expect = 6.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 159 PCLISDEPPEKLYPQLSCNHYL 94
P +SD P YPQ N YL
Sbjct: 26 PPSLSDTRPMLPYPQNYINSYL 47
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 20.2 bits (40), Expect = 6.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 290 VKLPLLYYLSGLTCS 334
VKL LY++S + CS
Sbjct: 337 VKLGSLYHISFMACS 351
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,287
Number of Sequences: 336
Number of extensions: 2091
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7299165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -