Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30180X
         (360 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical ...    42   1e-04
AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical...    42   1e-04
AC024848-2|AAV34781.1|  245|Caenorhabditis elegans Hypothetical ...    31   0.18 
AC024848-1|AAV34780.1|  258|Caenorhabditis elegans Hypothetical ...    31   0.18 
Z81592-5|CAB04727.1|  434|Caenorhabditis elegans Hypothetical pr...    28   1.7  
AC006744-1|AAF60506.2|  328|Caenorhabditis elegans Serpentine re...    27   3.9  
Z92782-3|CAB07189.2|  326|Caenorhabditis elegans Hypothetical pr...    26   6.9  
AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical ...    26   6.9  
AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical ...    26   6.9  
Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z82276-1|CAB05238.1|  319|Caenorhabditis elegans Hypothetical pr...    26   9.1  

>AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +2

Query: 251 FSIYLPPQADGGDVKLPLLYYLSGLTCSEQNFITKS 358
           F +Y+P      D KLP L+YLSGLTC+  NF+ KS
Sbjct: 32  FGVYIPDHKP--DEKLPALFYLSGLTCTHANFMEKS 65



 Score = 35.1 bits (77), Expect = 0.015
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +3

Query: 171 LESSNKIFGGYQKVYSHASSGLKCQMNF 254
           L SSN+ F G Q VY HASS  +C+M F
Sbjct: 5   LVSSNRSFKGRQFVYKHASSTTQCEMTF 32


>AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +2

Query: 251 FSIYLPPQADGGDVKLPLLYYLSGLTCSEQNFITKS 358
           F +Y+P      D KLP L+YLSGLTC+  NF+ KS
Sbjct: 32  FGVYIPDHKP--DEKLPALFYLSGLTCTHANFMEKS 65



 Score = 35.1 bits (77), Expect = 0.015
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +3

Query: 171 LESSNKIFGGYQKVYSHASSGLKCQMNF 254
           L SSN+ F G Q VY HASS  +C+M F
Sbjct: 5   LVSSNRSFKGRQFVYKHASSTTQCEMTF 32


>AC024848-2|AAV34781.1|  245|Caenorhabditis elegans Hypothetical
           protein Y67D8A.2c protein.
          Length = 245

 Score = 31.5 bits (68), Expect = 0.18
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +3

Query: 51  LDNFRGRQTEISAVVNSGYKIIVGIIFPEAHQKSNMDSLQLESSNK 188
           LD+ RGRQTE+     +  K + GI+F    Q  N+D+ + ++S++
Sbjct: 104 LDDDRGRQTELR---QTAVKTMRGILFSWMQQSKNLDAFKSQNSSE 146


>AC024848-1|AAV34780.1|  258|Caenorhabditis elegans Hypothetical
           protein Y67D8A.2a protein.
          Length = 258

 Score = 31.5 bits (68), Expect = 0.18
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +3

Query: 51  LDNFRGRQTEISAVVNSGYKIIVGIIFPEAHQKSNMDSLQLESSNK 188
           LD+ RGRQTE+     +  K + GI+F    Q  N+D+ + ++S++
Sbjct: 104 LDDDRGRQTELR---QTAVKTMRGILFSWMQQSKNLDAFKSQNSSE 146


>Z81592-5|CAB04727.1|  434|Caenorhabditis elegans Hypothetical
           protein T16G1.5 protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 157 WTACN*NRPIKFLVVIKKCILMHHL 231
           WT  N N P K ++ +  CI +HHL
Sbjct: 65  WTIPNENLPEKIILKLTSCINVHHL 89


>AC006744-1|AAF60506.2|  328|Caenorhabditis elegans Serpentine
           receptor, class t protein52 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 36  FKILFLDNFRGRQTEISAVVNSGYKIIVGIIF 131
           +KI+FL       T  +A + SGY + VG +F
Sbjct: 70  YKIMFLLGITDMLTTCTATILSGYLLTVGAVF 101


>Z92782-3|CAB07189.2|  326|Caenorhabditis elegans Hypothetical
           protein F14F8.4 protein.
          Length = 326

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 209 SVFSCIIWIKMPNEFSIYLPPQADGGDVKLPLLYYLSGLTCSEQNFIT 352
           SV S + +I++ N +S YL   + G  V +PL+  LS L C+    IT
Sbjct: 246 SVPSFLSYIEIRNPWS-YLVIISIGDAVTIPLIIQLSYLRCNVNEVIT 292


>AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2b protein.
          Length = 700

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +2

Query: 86  CRGK*WLQDNCGYNFSGGSSEIKH-GQLAIRIVQ*NFWWLS-KSVFS 220
           C  +  + DN    +SGG+ E+ H  +L   IV  + +WL  K  FS
Sbjct: 92  CSNQAMISDNWKPEYSGGTQELAHPDELPQTIVNDDDFWLKPKDFFS 138


>AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2a protein.
          Length = 741

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +2

Query: 86  CRGK*WLQDNCGYNFSGGSSEIKH-GQLAIRIVQ*NFWWLS-KSVFS 220
           C  +  + DN    +SGG+ E+ H  +L   IV  + +WL  K  FS
Sbjct: 133 CSNQAMISDNWKPEYSGGTQELAHPDELPQTIVNDDDFWLKPKDFFS 179


>Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical
           protein T28F3.4a protein.
          Length = 573

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = +3

Query: 21  YLSYQFK-ILFLDNF-RGRQTEISAVVNSGYKIIVGIIFPEAHQK---SNMDSLQLESSN 185
           YL   FK +L L     G  T +  +VN   KI+ GI    A +K   S    ++L  S 
Sbjct: 326 YLPNYFKDVLHLGVIANGTYTSVPNIVNFALKIVWGITIDRAKEKKIISGTFGVKLSQSI 385

Query: 186 KIFGG 200
             FGG
Sbjct: 386 ANFGG 390


>Z82276-1|CAB05238.1|  319|Caenorhabditis elegans Hypothetical
           protein K03D3.1 protein.
          Length = 319

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 9   FVFPYLSYQFKILFLDNFRGRQTEISAVVNSGYKII 116
           FVFP+  Y FK   L+  R ++T +   V+  YKI+
Sbjct: 37  FVFPFYVYVFK---LNKRRDKKTLLYPTVHHFYKIV 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,742,777
Number of Sequences: 27780
Number of extensions: 177750
Number of successful extensions: 367
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)