Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30180X
         (360 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   1.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   1.9  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   2.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   7.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   7.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 36  FKILFLDNFRGRQTEISAVVNSGY 107
           +K  ++     +++ ISA ++SGY
Sbjct: 319 YKYKYIREIMNKESRISAAIDSGY 342


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 36  FKILFLDNFRGRQTEISAVVNSGY 107
           +K  ++     +++ ISA ++SGY
Sbjct: 319 YKYKYIREIMNKESRISAAIDSGY 342


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
 Frame = -1

Query: 222 HENTLFDNHQKFYWTI-------LIASCPCLISDEPPEKLYPQLSCNHYLPR 88
           + N   +N++K Y+ I       +    P    + PP  + P +S    +PR
Sbjct: 340 YNNNYNNNYKKLYYNINYIEQIPVPVPVPIYCGNFPPRSMEPWISMQEQIPR 391


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 5/19 (26%), Positives = 14/19 (73%)
 Frame = -1

Query: 225 MHENTLFDNHQKFYWTILI 169
           +++NT+ +N+Q+  W+  +
Sbjct: 379 LYQNTMSNNNQRTEWSATV 397


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 5/19 (26%), Positives = 14/19 (73%)
 Frame = -1

Query: 225 MHENTLFDNHQKFYWTILI 169
           +++NT+ +N+Q+  W+  +
Sbjct: 417 LYQNTMSNNNQRTEWSATV 435


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 69  RQTEISAVVNSGYKIIVGII 128
           R  ++ AVV   YK+ V +I
Sbjct: 120 RDVQVRAVVAQAYKVDVEVI 139


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 69  RQTEISAVVNSGYKIIVGII 128
           R  ++ AVV   YK+ V +I
Sbjct: 120 RDVQVRAVVAQAYKVDVEVI 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,627
Number of Sequences: 438
Number of extensions: 2332
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)