Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30178
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.8  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 212 TPSVTRNPTHCTSKIY 259
           TP   +N T C  KIY
Sbjct: 19  TPGFRKNRTTCPEKIY 34


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 297 QAPSLPILLLIFSYIFEVQC 238
           QAP L + L IF+Y+  V C
Sbjct: 129 QAPVLQLFLYIFTYL-SVTC 147


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 212 TPSVTRNPTHCTSKIY 259
           TP   +N T C  KIY
Sbjct: 19  TPGFRKNRTTCPEKIY 34


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 575 SASWQELASLITRLNNFVF 631
           S  ++EL S + R+N FV+
Sbjct: 603 STPFKELTSNVFRMNQFVY 621


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,050
Number of Sequences: 336
Number of extensions: 3121
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)