BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30178 (650 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_06_0628 - 25643006-25643123,25643314-25643471,25643559-256436... 66 3e-11 01_05_0142 - 18564697-18564792,18564824-18564928,18565606-185656... 33 0.26 02_05_1057 + 33809982-33810366,33810436-33810687,33810727-338109... 29 2.4 01_01_1163 + 9258427-9258451,9258581-9258681,9258890-9258967,925... 29 2.4 04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 29 4.2 09_02_0062 - 3742857-3743045,3744641-3744916,3745933-3745992,374... 28 5.6 09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534... 28 7.4 01_05_0078 + 17931998-17932062,17933320-17933416,17933506-179336... 27 9.8 >11_06_0628 - 25643006-25643123,25643314-25643471,25643559-25643687, 25644378-25644451,25644771-25644798 Length = 168 Score = 65.7 bits (153), Expect = 3e-11 Identities = 35/81 (43%), Positives = 49/81 (60%) Frame = +3 Query: 249 QRYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMMEYR 428 +RY+K L AKL+ ++ E FK N+ K +LG+ K+LQFF GESM DG + Y+ Sbjct: 92 KRYIKNLSAKLDA---EKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYK 148 Query: 429 DFDGTQIPIMMFFKHGLEEEK 491 DG P ++F HGL+E K Sbjct: 149 --DGATDPTFLYFSHGLKEVK 167 Score = 57.6 bits (133), Expect = 8e-09 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%) Frame = +1 Query: 1 ITGDEMFSDTYKMKLVDE-VIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGTDSAVES 171 +TGDE+ SD++ + ++ +++EV G+ V + D+ I G NPSAE DEG D Sbjct: 8 LTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDI-GANPSAEGGGDDEGVDDQAVK 66 Query: 172 GVDIVLNHRLVETYAFGDKKSYTLYLKDI*KN 267 VDIV RL E F DKK + ++K KN Sbjct: 67 VVDIVDTFRLQEQPPF-DKKQFVTFMKRYIKN 97 >01_05_0142 - 18564697-18564792,18564824-18564928,18565606-18565678, 18566262-18567637 Length = 549 Score = 32.7 bits (71), Expect = 0.26 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = -1 Query: 422 FHHGNHAITIHGLPSKEL----KFLKPAEDVFHYFVHVCFKYFNLVRRL 288 FHH H ++ PSK+L ++L+ FH F ++C++Y + R+L Sbjct: 245 FHHMLHLFQMYLKPSKKLVEGSQYLERGR-YFHSFANICYRYLKIGRKL 292 >02_05_1057 + 33809982-33810366,33810436-33810687,33810727-33810926, 33811021-33811122 Length = 312 Score = 29.5 bits (63), Expect = 2.4 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 3/83 (3%) Frame = +1 Query: 16 MFSDTYKMKLVDEVI-YEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDSAVESGVDIVLN 192 +FS VDE I +E+ + G+I ++GF G D+AVE ++ V Sbjct: 101 LFSGAETTDEVDEYIEFEINVGCIGGGGGNITVDGFRGGGSGGGRGGDAAVEIEINEV-- 158 Query: 193 HRLVETYAFGDKKS--YTLYLKD 255 R+ E K S Y L L D Sbjct: 159 -RVSEVRGIAGKASGTYVLVLLD 180 >01_01_1163 + 9258427-9258451,9258581-9258681,9258890-9258967, 9259625-9259765,9260263-9260329,9261039-9261193, 9261285-9261386,9262022-9262141,9262688-9262855 Length = 318 Score = 29.5 bits (63), Expect = 2.4 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = -2 Query: 343 SFITLFMFVLNTSTWSGAFSSNFATNFFIYL*GTMCRISCHRRRMFRLACG 191 SFI F+ + TS + F NF+ FIYL G +S +R + CG Sbjct: 156 SFIPFFLDIPVTSRFR-IFGVNFSDKSFIYLAGLQLLLSSGKRSLIPGICG 205 >04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035, 8078108-8078360,8078613-8078768,8078854-8079770, 8079858-8079927,8082310-8082416,8082722-8082755, 8083621-8083940,8084031-8084820,8084890-8085046, 8085647-8086068 Length = 1255 Score = 28.7 bits (61), Expect = 4.2 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Frame = +1 Query: 85 TRAQGDIQIEGFNPSAEEADEGTDSAVESGVD--IVLNHRLVETYAFGD 225 TR+ +Q++GF PSA ++ +G+ + V S + IV +L +T G+ Sbjct: 827 TRSSDKVQLKGFVPSAPKSSQGSRTYVSSAKNRFIVPKEQLQKTSTEGN 875 >09_02_0062 - 3742857-3743045,3744641-3744916,3745933-3745992, 3746554-3748102,3748183-3748418 Length = 769 Score = 28.3 bits (60), Expect = 5.6 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 103 IQIEGFNPSAEEADEGTDSAVESGVDIVLNHRLVETYAFGDKK 231 + I N S EE +E ++A VD+ LN +E +G+KK Sbjct: 711 VSINYENASLEEVEEA-EAAARYAVDVHLNRPTLELKRYGEKK 752 >09_04_0741 - 19852339-19852497,19853185-19853246,19853352-19853415, 19853561-19853614,19853744-19853890,19854460-19854564, 19854651-19854794,19854987-19855093,19855613-19855712, 19855804-19855833,19856492-19856608,19856705-19856828, 19857143-19857189,19857272-19857400,19857777-19857852, 19858446-19858543,19858630-19858671,19858811-19859044 Length = 612 Score = 27.9 bits (59), Expect = 7.4 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = -3 Query: 447 FAYHQSLYIPSWQPC-HHNPWTPQ*RTEVP 361 F YH +Y+ SW C H N ++ Q + +P Sbjct: 264 FLYHGRMYVSSWHICFHSNVFSKQIKVMLP 293 >01_05_0078 + 17931998-17932062,17933320-17933416,17933506-17933601, 17933957-17933988,17935143-17935595,17935831-17935975, 17936058-17936159,17937798-17937890,17939448-17939489, 17940092-17940202,17940446-17940517,17940596-17940714, 17940981-17941044,17941133-17942782 Length = 1046 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -2 Query: 475 PCL-KNIMIGICVPSKSLYSIMATMPSQSMDSPV 377 PCL K+ GI P+K ++ TMPS S + + Sbjct: 200 PCLLKDASTGITKPAKEQGKLLVTMPSSSTSTKI 233 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,334,369 Number of Sequences: 37544 Number of extensions: 310115 Number of successful extensions: 788 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 764 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 786 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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