Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30178
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    93   1e-19
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    31   0.71 
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z81491-5|CAB04021.1|  225|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
 Frame = +1

Query: 4   TGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGTDSAVESGV 177
           T DE+ SD++ MKLVD+++YE  G+ V R +G+I + G NPSAEE   D+G+D  VE G+
Sbjct: 9   TDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGI 68

Query: 178 DIVLNHRLVETYAFGDKKSYTLYLKDI*KN 267
           DIVLNH+LVE   + D   +  Y+K   KN
Sbjct: 69  DIVLNHKLVEMNCYEDASMFKAYIKKFMKN 98



 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
 Frame = +3

Query: 249 QRYMKKLVAKLEEKAPDQVEV--FKTNMNKVMKDILG--RFKELQFFTGESMDC---DGM 407
           +++MK ++  +E+   D+ +V  FK  +   +  +L   RFK L FF GE       +G 
Sbjct: 93  KKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQ 152

Query: 408 VAMMEYRDFDGTQIPIMMFFKHGLEEEK 491
           VA++EYRD DGT++P +M  K  + EEK
Sbjct: 153 VAIIEYRDVDGTEVPTLMLVKEAIIEEK 180


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 332 FVHVCFKYFNLVRRLLFQFCY*FFHIS 252
           F+++C +Y    RR L  FCY  F IS
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDIS 163


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 118  FNPSAEEADEGTDSAVESG-VDIVLNH 195
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 118  FNPSAEEADEGTDSAVESG-VDIVLNH 195
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81491-5|CAB04021.1|  225|Caenorhabditis elegans Hypothetical
           protein D1086.5 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 228 EILHIVPQRYMKKLVAKLEEKAPDQV 305
           ++ H+ P  Y +K + ++ EK PDQV
Sbjct: 103 DVFHLGPMYYCEKTLKEVIEKTPDQV 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,370,698
Number of Sequences: 27780
Number of extensions: 283626
Number of successful extensions: 843
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)