Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30175
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006733-8|AAF60490.1| 600|Caenorhabditis elegans Hypothetical ... 31 0.83
U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical pr... 28 5.8
U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein. 28 5.8
U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g ... 28 5.8
U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g ... 28 5.8
U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g ... 28 5.8
U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinas... 28 5.8
>AC006733-8|AAF60490.1| 600|Caenorhabditis elegans Hypothetical
protein Y32H12A.7 protein.
Length = 600
Score = 31.1 bits (67), Expect = 0.83
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -1
Query: 596 WWRYMSSSDKHNGPSSWSCPMWARAYR--CGRRHDD--VHLHLQTSNR 465
WWRY+ S +H+GP+ WA R ++ D LH+QT N+
Sbjct: 120 WWRYLLWSLQHSGPTFIKLGQWASTRRDIFTKKFCDRLSVLHIQTKNK 167
>U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical
protein T27F7.1 protein.
Length = 208
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 288 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKD 410
K+T V SM +PE + T R M +EMM G + M+++
Sbjct: 104 KSTEVMKSMQQLVKVPEIMKTMREMSAEMMKLGIIEEMIEE 144
>Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical
protein F43C1.2a protein.
Length = 376
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 315 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW---CKSRNGFPQRLMLP-LGTIGGLE 482
D GF+ EY++TR E+M + G T D W C R + P + L
Sbjct: 182 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAEMLSNRPLFPGKHYLDQLN 241
Query: 483 MQMYVIVSPSAPVCSC 530
+ + V+ SPS C
Sbjct: 242 LILAVVGSPSNADLQC 257
>Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical
protein F43C1.2b protein.
Length = 444
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 315 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW---CKSRNGFPQRLMLP-LGTIGGLE 482
D GF+ EY++TR E+M + G T D W C R + P + L
Sbjct: 250 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAEMLSNRPLFPGKHYLDQLN 309
Query: 483 MQMYVIVSPSAPVCSC 530
+ + V+ SPS C
Sbjct: 310 LILAVVGSPSNADLQC 325
>U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein.
Length = 376
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 315 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW---CKSRNGFPQRLMLP-LGTIGGLE 482
D GF+ EY++TR E+M + G T D W C R + P + L
Sbjct: 182 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAEMLSNRPLFPGKHYLDQLN 241
Query: 483 MQMYVIVSPSAPVCSC 530
+ + V+ SPS C
Sbjct: 242 LILAVVGSPSNADLQC 257
>U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform c protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 288 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 380
+N + ++DM+ F P RR++E++ P
Sbjct: 104 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 134
>U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform b protein.
Length = 290
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 288 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 380
+N + ++DM+ F P RR++E++ P
Sbjct: 110 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 140
>U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform a protein.
Length = 363
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 288 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 380
+N + ++DM+ F P RR++E++ P
Sbjct: 183 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 213
>U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinase
protein.
Length = 444
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 315 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW---CKSRNGFPQRLMLP-LGTIGGLE 482
D GF+ EY++TR E+M + G T D W C R + P + L
Sbjct: 250 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAEMLSNRPLFPGKHYLDQLN 309
Query: 483 MQMYVIVSPSAPVCSC 530
+ + V+ SPS C
Sbjct: 310 LILAVVGSPSNADLQC 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,708,425
Number of Sequences: 27780
Number of extensions: 405595
Number of successful extensions: 1280
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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