Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30171
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 118 5e-27
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 116 2e-26
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 112 2e-25
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 110 1e-24
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 107 6e-24
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 103 2e-22
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 93 3e-19
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 59 3e-09
12_02_0413 - 18803875-18803938,18804009-18804787 30 2.1
10_06_0107 + 10840633-10841200,10841364-10841488,10856838-10857380 28 6.4
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 6.4
02_05_0469 + 29297209-29297527,29297847-29297961,29298060-292982... 28 6.4
02_05_0552 - 29911280-29912541,29912633-29912762 28 8.4
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 118 bits (284), Expect = 5e-27
Identities = 56/87 (64%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 DVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P
Sbjct: 276 NVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVP 335
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVAT 508
++ PESKVFYLKMKGDYYRYLAE T
Sbjct: 336 SSTAPESKVFYLKMKGDYYRYLAEFKT 362
Score = 71.3 bits (167), Expect = 7e-13
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = +1
Query: 517 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPTRRVN 675
R E++ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSP R N
Sbjct: 366 RKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACN 418
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Frame = +3
Query: 93 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYK 254
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYK 275
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 597 PHKAGSGVKFLSLLL*DIKFADKACQLAKQAFDDAIAE 710
P + G + F + D+AC LAKQAFD+AI+E
Sbjct: 393 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISE 430
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 116 bits (278), Expect = 2e-26
Identities = 54/87 (62%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 DVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P
Sbjct: 58 NVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVP 117
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVAT 508
++ PESKVFYLKMKGDYYRYLAE T
Sbjct: 118 SSTAPESKVFYLKMKGDYYRYLAEFKT 144
Score = 71.3 bits (167), Expect = 7e-13
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = +1
Query: 517 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPTRRVN 675
R E++ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSP R N
Sbjct: 148 RKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACN 200
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = +3
Query: 93 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYK 254
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYK 57
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 597 PHKAGSGVKFLSLLL*DIKFADKACQLAKQAFDDAIAE 710
P + G + F + D+AC LAKQAFD+AI+E
Sbjct: 175 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISE 212
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 112 bits (270), Expect = 2e-25
Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 DVVGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SWR++SSIEQK EG +E + KEYR K+E EL +IC +L LLD HL+P
Sbjct: 52 NVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVP 111
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVAT 508
++ ESKVFYLKMKGDY+RYLAE T
Sbjct: 112 SSTAAESKVFYLKMKGDYHRYLAEFKT 138
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +1
Query: 517 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPTRRVN 675
R E + AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSP + N
Sbjct: 142 RKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACN 194
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +3
Query: 108 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYK 254
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYK 51
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 597 PHKAGSGVKFLSLLL*DIKFADKACQLAKQAFDDAIAE 710
P + G + F + DKAC LAKQAFD+AI+E
Sbjct: 169 PIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISE 206
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 110 bits (264), Expect = 1e-24
Identities = 53/84 (63%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = +2
Query: 254 DVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P
Sbjct: 57 NVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVP 116
Query: 428 KASNPESKVFYLKMKGDYYRYLAE 499
A+ ESKVFYLKMKGDY+RYLAE
Sbjct: 117 SATAAESKVFYLKMKGDYHRYLAE 140
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +1
Query: 517 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPTRRVN 675
R E++ AY+ A +I+ A + THPIRLGLALNFSVFYYEILNSP R N
Sbjct: 147 RKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACN 199
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +3
Query: 96 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYK 254
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYK 56
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 597 PHKAGSGVKFLSLLL*DIKFADKACQLAKQAFDDAIAE 710
P + G + F + D+AC LAKQAFDDAIAE
Sbjct: 174 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAE 211
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 107 bits (258), Expect = 6e-24
Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = +2
Query: 254 DVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SWR+ISSIEQK EG A + YR K+E EL IC +L LLD HL+P
Sbjct: 35 NVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALLDSHLVP 94
Query: 428 KASNPESKVFYLKMKGDYYRYLAE 499
A ESKVFYLKMKGDY+RYLAE
Sbjct: 95 SAGAAESKVFYLKMKGDYHRYLAE 118
Score = 71.3 bits (167), Expect = 7e-13
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = +1
Query: 511 ETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPTRRVN 675
+ R E + AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSP R N
Sbjct: 123 DERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACN 177
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 597 PHKAGSGVKFLSLLL*DIKFADKACQLAKQAFDDAIAE 710
P + G + F + D+AC LAKQAFD+AI+E
Sbjct: 152 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISE 189
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 204 GVELSNEERNLLSVAYK 254
G EL+ EERNLLSVAYK
Sbjct: 18 GEELTVEERNLLSVAYK 34
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 103 bits (246), Expect = 2e-22
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 DVVGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SWR++SSIEQK EG + A+ YR +VE EL IC +L LLD+ L+P
Sbjct: 62 NVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVP 121
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVAT 508
A+ ++KVFYLKMKGDY+RYLAE T
Sbjct: 122 AAAAVDAKVFYLKMKGDYHRYLAEFKT 148
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +1
Query: 517 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPTR 666
R + + AYQ A +I+ ++ PTHPIRLGLALNFSVFYYEILNSP R
Sbjct: 152 RKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDR 201
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Frame = +3
Query: 114 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYK 254
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYK
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYK 61
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 597 PHKAGSGVKFLSLLL*DIKFADKACQLAKQAFDDAIAE 710
P + G + F + D+AC LAKQAFD+AI+E
Sbjct: 179 PIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISE 216
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 92.7 bits (220), Expect = 3e-19
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +2
Query: 260 VGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 439
+GARR+SWR++ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++
Sbjct: 53 IGARRASWRILESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANS 112
Query: 440 PESKVFYLKMKGDYYRYLAEVAT 508
E+ VF+ KMKGDYYRYLAE +T
Sbjct: 113 GENVVFFYKMKGDYYRYLAEFST 135
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +3
Query: 111 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYK 254
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFK 50
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 59.3 bits (137), Expect = 3e-09
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Frame = +2
Query: 254 DVVGARRSSWRVISSIEQK--TEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+++GA+R++ R+I SIE K T+G E + EYR KVE E+ +IC DV+ ++DK
Sbjct: 29 NLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINIIDK---- 84
Query: 428 KASNPESKVFYLKMKGDYYRYLAE--VATEKPDI 523
KGDYYRYLAE TEK ++
Sbjct: 85 --------------KGDYYRYLAEFKTGTEKIEV 104
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 559 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPTR 666
A + ++ + PT PIRLGLALN SVFY EI+NSP +
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDK 181
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 660 DKACQLAKQAFDDAIAE 710
DKACQLAK AFD+A+AE
Sbjct: 180 DKACQLAKNAFDEAVAE 196
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 171 MAAAMKEVTETGVELSNEERNLLSVAYK 254
M AM V + L+ EERNLLSV YK
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYK 28
>12_02_0413 - 18803875-18803938,18804009-18804787
Length = 280
Score = 29.9 bits (64), Expect = 2.1
Identities = 28/116 (24%), Positives = 54/116 (46%)
Frame = +2
Query: 227 EEPPFSCL*DVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGL 406
E+P F L + + + R+ + ++ K + KE+ +++RE+ YD
Sbjct: 16 EQPRFKDLKNDLKSLRAELASMEAVMLKFATQDDTDLQVKEWM----RQVREVGYDTDDW 71
Query: 407 LDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATEKPDILL*RIHRKHTKMLLKSA 574
+D H + A S++F + + R LAE+ E D + R+ T+ +L+SA
Sbjct: 72 IDSHPLVAAETKGSRIF---SRNNRRRKLAELIKELKDRVEDASQRR-TRYMLQSA 123
>10_06_0107 + 10840633-10841200,10841364-10841488,10856838-10857380
Length = 411
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 368 KELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATEKPDILL*RIHRK 547
KE+RE+ YDV LD+ + A N ++ + K +R A+ A ++ R
Sbjct: 70 KEVRELSYDVDDFLDEIALAAADNADA--ILIAGKVSKFRERAQEARQRRRRT--RYGLC 125
Query: 548 HTKMLLKSARRKCS 589
H +S+RR+CS
Sbjct: 126 HHPTSRRSSRRRCS 139
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +2
Query: 371 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 475
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>02_05_0469 +
29297209-29297527,29297847-29297961,29298060-29298255,
29298427-29298540,29298695-29298868,29299326-29299520,
29299666-29299788,29299892-29300004,29300117-29300237,
29300363-29300623,29301712-29301921
Length = 646
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 410 DKHLIPKASNPESKVFYLKMK---GDYYRYLAEVATEKPDILL*RI 538
D +L+P +PES YL+M+ G Y E T+ P I+ RI
Sbjct: 275 DIYLLPPGEDPESCQSYLRMRNREGKYNLMFEEWVTDNPFIISPRI 320
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 39 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 185
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,819,420
Number of Sequences: 37544
Number of extensions: 414571
Number of successful extensions: 1291
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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