Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30170
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   7.8  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   7.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -2

Query: 418 LRLLVSICFQTFFSNSFSFCILFLVTRTK*INVVVIVVFRC 296
           + LL+ +C   F+     FC  F++     + ++ I  F C
Sbjct: 250 VHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYC 290


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 574 NKLQIMCVIEDDKVSVDLLTEKIQEFEDFV-QSVDIAAFNKI*TAITCNIFIS 729
           N+L  +C + D+K+S  +LT  +  F   + Q  +    +K  T  T   FIS
Sbjct: 272 NRLCHLCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLHKATTLETVYYFIS 324


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 473 DETDMKEMENQVALLKWKAFSGEPPNLCLLGM 568
           D+TD ++  N  A +++    G PP+   LG+
Sbjct: 230 DQTDEQKTLNVAAGIQYWLDEGAPPSKINLGL 261


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 473 DETDMKEMENQVALLKWKAFSGEPPNLCLLGM 568
           D+TD ++  N  A +++    G PP+   LG+
Sbjct: 231 DQTDEQKTLNVAAGIQYWLDEGAPPSKINLGL 262


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 473 DETDMKEMENQVALLKWKAFSGEPPNLCLLGM 568
           D+TD ++  N  A +++    G PP+   LG+
Sbjct: 231 DQTDEQKTLNVAAGIQYWLDEGAPPSKINLGL 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,102
Number of Sequences: 336
Number of extensions: 3378
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)