Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30170
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    92   4e-19
L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...    92   4e-19
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    32   0.48 
AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    29   4.5  

>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 45/63 (71%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
 Frame = +1

Query: 511 TIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEDFVQSVDIAAF 687
           +IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI  +FED VQSVDI AF
Sbjct: 201 SIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAF 260

Query: 688 NKI 696
           NKI
Sbjct: 261 NKI 263



 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 32/61 (52%), Positives = 36/61 (59%)
 Frame = +2

Query: 326 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 505
           DLFGS                L AYA KK+ K   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198

Query: 506 V 508
           V
Sbjct: 199 V 199


>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 45/63 (71%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
 Frame = +1

Query: 511 TIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEDFVQSVDIAAF 687
           +IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI  +FED VQSVDI AF
Sbjct: 151 SIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAF 210

Query: 688 NKI 696
           NKI
Sbjct: 211 NKI 213



 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = +3

Query: 39  VGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIAS 215
           V DVK+  GL   N  LAE+++ +G+  S  D Q+F  +G AP A+  P+V RWY  +AS
Sbjct: 2   VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61

Query: 216 YTSAERKTWS 245
           YT AERKTW+
Sbjct: 62  YTDAERKTWA 71



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 33/61 (54%), Positives = 38/61 (62%)
 Frame = +2

Query: 326 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 505
           DLFGS                L AYA+KK+KK   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 89  DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKL 148

Query: 506 V 508
           V
Sbjct: 149 V 149


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -3

Query: 249 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 91
           P  + C QP CM   + + VV+     PAP Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


>AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical
           protein W07E6.2 protein.
          Length = 473

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +1

Query: 517 EMEGLLWGASKLVPVGYGINKLQIMC----VIEDDKVSVDLLTEKIQEFEDFVQ 666
           E E  L G+  LVPV    N+LQI+C       DD V +   T +  E  D ++
Sbjct: 14  EDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVDSIR 67


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 249 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 91
           P  + C QP CM   + + VV+     PA  Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,162,037
Number of Sequences: 27780
Number of extensions: 305881
Number of successful extensions: 920
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)