Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30168
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   6.2  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 594 LNVSLIHSTTTQG*YVIKIQKSVQRRI 514
           LN SLIHST   G  ++K  +++  +I
Sbjct: 194 LNTSLIHSTHLNG-DIVKEHQNLHNKI 219


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 405 VDSKLRYLHIPVKFAPSERDFNYCTQFI 488
           V +  RY   P+ F+P + D   CT  I
Sbjct: 181 VQAAARYRKEPLAFSPEDLDPFACTHVI 208


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 503 FLQTFDELSTIIKVTFGWSKLN 438
           FL  F  LS    VT+ WS ++
Sbjct: 136 FLYIFTYLSVTCYVTYAWSPID 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,657
Number of Sequences: 336
Number of extensions: 3274
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)