Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30168
         (766 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630...    30   1.8  
09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273...    28   7.1  

>02_05_0481 +
           29361542-29361669,29362091-29362341,29362820-29363002,
           29363099-29363206,29363583-29363697,29363781-29364819,
           29364904-29365014,29365268-29365326,29366601-29366763,
           29367162-29367435,29367530-29367680,29367766-29367877,
           29367978-29368143,29368261-29368331,29368474-29368565,
           29368721-29368883,29369134-29369205,29369236-29369263,
           29369519-29369910,29369991-29370106,29370201-29370498,
           29370820-29371139,29371332-29371590,29371985-29372302,
           29372423-29372527,29372648-29372776,29374001-29374381,
           29374467-29374604,29374949-29375185,29375264-29375569
          Length = 2094

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/89 (22%), Positives = 39/89 (43%)
 Frame = +2

Query: 470 LLYSVHQMFVKNLNRILL*TDFCILMTYYPCVVVLCISETFNRSEPRFVFIVETVYRVCI 649
           ++ + H+ F    + +LL    C +M +   +  LC  E    S+PR    +  +   C+
Sbjct: 601 VINATHEQFEFGFSILLLSPVVCSIMAF---IWSLCAEEMTMTSKPRKYGFIAWLLSTCV 657

Query: 650 TLIIIKKEKNTIYP*IKYTVS*FVDCFIF 736
            L++    K+++   +  TV   V C  F
Sbjct: 658 GLLLSFLSKSSVILGLSLTVPLMVACLSF 686


>09_04_0329 +
           16726501-16726750,16726843-16726930,16727280-16727333,
           16727590-16727739,16727884-16728015,16728279-16728423,
           16728514-16728552,16728638-16728712,16728935-16728994,
           16729120-16729184,16729519-16729609,16729806-16729820
          Length = 387

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -3

Query: 137 RSVLLQVRELLSVDCASTLIPDGLDGLLVLHAELDERDGDHDG 9
           R+VLL VR  L V C+S L    L+  + LH  LDE      G
Sbjct: 188 RNVLLGVRRELGVRCSSKLCTADLEAEIFLHL-LDEYSSRQKG 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,219,681
Number of Sequences: 37544
Number of extensions: 291087
Number of successful extensions: 650
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)