Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30167
(690 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 135 8e-31
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 100 7e-20
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 93 6e-18
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 86 9e-16
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 65 1e-09
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 65 1e-09
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 63 5e-09
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 59 9e-08
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 58 2e-07
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 58 2e-07
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 55 1e-06
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 54 3e-06
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 54 4e-06
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 53 6e-06
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 53 8e-06
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 53 8e-06
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 52 1e-05
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 51 2e-05
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 50 5e-05
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 49 1e-04
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 49 1e-04
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 48 2e-04
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 45 0.002
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 43 0.008
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 41 0.033
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 40 0.076
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 39 0.13
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 38 0.23
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 38 0.31
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 36 0.93
UniRef50_UPI0000D9B719 Cluster: PREDICTED: similar to 60S riboso... 36 1.2
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 35 1.6
UniRef50_Q03567 Cluster: Uncharacterized transporter C38C10.2; n... 35 1.6
UniRef50_A4RCU7 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 2.9
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 5.0
UniRef50_P09705 Cluster: Uncharacterized protein HHRF4; n=4; Cyt... 33 6.6
UniRef50_P30182 Cluster: DNA topoisomerase 2; n=4; Viridiplantae... 33 6.6
UniRef50_UPI0000D9B7E2 Cluster: PREDICTED: hypothetical protein;... 33 8.7
UniRef50_Q4KT76 Cluster: Hoar peptide; n=1; Chrysodeixis chalcit... 33 8.7
UniRef50_A5IXJ8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa... 33 8.7
UniRef50_Q17551 Cluster: E3 ubiquitin-protein ligase rpm-1; n=3;... 33 8.7
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 135 bits (327), Expect = 8e-31
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = -3
Query: 253 KRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 74
KRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ
Sbjct: 207 KRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 266
Query: 73 YPHR 62
YPHR
Sbjct: 267 YPHR 270
Score = 130 bits (313), Expect = 4e-29
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = -3
Query: 688 PKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRP 509
PKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRP
Sbjct: 61 PKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRP 120
Score = 101 bits (242), Expect = 2e-20
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -1
Query: 402 FCFQFVPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTANAK 244
F F P+RRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRT K
Sbjct: 157 FAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTVKRK 209
Score = 91.1 bits (216), Expect = 2e-17
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = -2
Query: 509 HLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
+LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP
Sbjct: 121 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 163
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 99.5 bits (237), Expect = 7e-20
Identities = 77/216 (35%), Positives = 104/216 (48%), Gaps = 7/216 (3%)
Frame = -3
Query: 688 PKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRP 509
P EK K VK+IGG KNGG RTV LK+ K+ YPT+ ++ FS+H R R
Sbjct: 53 PVVEKAKVPIKKVKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRR 112
Query: 508 T*R*ELFAFSSLVDMQARGLYLLEFCPAVCF*LLDLLLSIRARTPYSSALCD-RHLHQNF 332
Q + + LL+ + LLL P++ C R + Q +
Sbjct: 113 NLTPGTVLILLAGRHQGKRVVLLKVLAS------GLLL---VTGPFALNSCPLRRVSQRY 163
Query: 331 ---TRXXXXXXXXXXXXXQEE*EVRQTYSKR--KEGD-DIFATKKEKYVPSEQRKTDQKT 170
T + R+ +K+ K G+ DIFA KKE++VP+EQRK DQK
Sbjct: 164 VIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEADIFAAKKERFVPNEQRKKDQKE 223
Query: 169 VDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHR 62
VD A++K I A P+ K YL+ F L SSQYPHR
Sbjct: 224 VDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYPHR 259
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = -2
Query: 509 HLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
+L GTV ILLAGRH GKRVVL+ +L SGLLLVTGPFA NSCP
Sbjct: 113 NLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCP 155
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = -1
Query: 402 FCFQFVPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNK-KCVKRTANA 247
F P+RR+ QRYVIGTS+++ LG FK+P+H ND YF++ K K K+T A
Sbjct: 149 FALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA 201
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 93.1 bits (221), Expect = 6e-18
Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 8/216 (3%)
Frame = -3
Query: 685 KPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIR 512
K +K K L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R
Sbjct: 82 KKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLR 141
Query: 511 PT*R-*ELFAFSSLVDMQARGLYLLEFCPAVCF*LLDLLLSIRARTPYSSALCDRHLHQN 335
+ + + R ++L + + L+L+ R P R HQ
Sbjct: 142 ASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLN---RVPL------RRTHQK 192
Query: 334 F-----TRXXXXXXXXXXXXXQEE*EVRQTYSKRKEGDDIFATKKEKYVPSEQRKTDQKT 170
F T+ + ++ R + +IF T+KEKY +EQRK DQK
Sbjct: 193 FVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKA 252
Query: 169 VDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHR 62
VD ++ I A P L+GYL++ F L + YPH+
Sbjct: 253 VDSQILPKIKAIPQ---LQGYLRSVFALTNGIYPHK 285
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNK 274
VP+RR Q++VI TST+I + N K+PKH D YFKK K
Sbjct: 184 VPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKK 221
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
GT+ I+L GRH GKRVV + L SGLLLVTGP N P
Sbjct: 147 GTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 85.8 bits (203), Expect = 9e-16
Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 7/215 (3%)
Frame = -3
Query: 685 KPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPT 506
K + KK V+ K+IGG+KNGGTR V ++ FYP + + +K+ +IR +
Sbjct: 35 KKAQKKKPLVIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKS 94
Query: 505 *R*ELFAFSSLVDMQARGLYLLEFCPAVCF*LLDLLLSIRARTPYSSALCDRHLHQNFTR 326
+ + + + LL+ + L+ L + R P R +HQ
Sbjct: 95 LQPGTILILLAGVNRGKRVVLLKALKSGLL-LVSGPLKVN-RVPL------RRVHQKLVI 146
Query: 325 XXXXXXXXXXXXXQEE*EVRQTYSKR-------KEGDDIFATKKEKYVPSEQRKTDQKTV 167
E + TY +R KEGD IFA+K E+Y P+EQRK DQ V
Sbjct: 147 ATSTRIDISNVKVPEH--INDTYFRRHKVKKEAKEGD-IFASKPERYTPTEQRKKDQAEV 203
Query: 166 DEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHR 62
D ++KAI A+PD +L YL+ FGL+++ PHR
Sbjct: 204 DVQLLKAIKAQPDAAMLVKYLRTIFGLKNNMIPHR 238
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTANAKRVMTSLPQK 217
VP+RR+ Q+ VI TSTRI + N K+P+H ND YF+++K VK+ A + S P++
Sbjct: 135 VPLRRVHQKLVIATSTRIDISNVKVPEHINDTYFRRHK--VKKEAKEGDIFASKPER 189
Score = 49.2 bits (112), Expect = 9e-05
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
L+ GT+ ILLAG + GKRVVL+ L SGLLLV+GP N P
Sbjct: 95 LQPGTILILLAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVP 136
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = -3
Query: 247 KEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 68
KE DIF K++Y ++ RK DQKT+D AV+ +I D K+L GYL+ FGL QYP
Sbjct: 63 KEKKDIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGLSKRQYP 122
Query: 67 H 65
H
Sbjct: 123 H 123
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -1
Query: 402 FCFQFVPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNK 274
F VPVRRI Q++V+ TST+I + K+P DDYFK+ K
Sbjct: 17 FSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTK 59
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = -3
Query: 250 RKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 71
+K G +IFA+ K +Y SEQRK D KTVD ++ AI P+ K L GYL F L +QY
Sbjct: 152 QKTGKNIFASGKTEYTVSEQRKKDIKTVDAPILAAIKKHPEHKFLFGYLGTRFSLGKNQY 211
Query: 70 PHR 62
PH+
Sbjct: 212 PHK 214
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCP 381
GTV I+LAGRH GKRVV + LP SGLLLVTGP N P
Sbjct: 74 GTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFP 113
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = -1
Query: 384 PVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTAN 250
P+RRI Q +VI TS ++++ K+P+H ND+YFK+ K N
Sbjct: 113 PLRRIGQAFVIATSLKVNVSGVKIPEHINDEYFKRKSTAQKTGKN 157
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = -3
Query: 250 RKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 71
RK+ +IF K +++V SE+ K Q VD+ V++A+ A P+KK+L YL A F LR+ Y
Sbjct: 203 RKDEGEIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPEKKMLLHYLAATFSLRNRMY 262
Query: 70 PHR 62
PH+
Sbjct: 263 PHK 265
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
GTV ILLAG H GKRVV + L +GLL VTGP+ N CP
Sbjct: 123 GTVLILLAGPHRGKRVVFLKQLKTGLLPVTGPYGVNGCP 161
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = -1
Query: 384 PVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTANAKRVMTSLPQK 217
P+RRI Q YVI TST++ L KLP+ +D YFK+NK + + + + PQ+
Sbjct: 161 PLRRINQIYVIATSTKLDLSKVKLPEGLDDRYFKRNKGPKRGRKDEGEIFEAKPQE 216
Score = 46.0 bits (104), Expect = 9e-04
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3
Query: 685 KPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 569
K ++ +K V VK++ GEKNGG R +PLK+ + YPT++
Sbjct: 58 KEKRKRKKRVTVKRVKGEKNGGKRVLPLKKERRSYPTED 96
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 59.3 bits (137), Expect = 9e-08
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = -3
Query: 250 RKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 71
+ + +F+T+ +KY S+ RK DQK VD + AI + PD K+L YL++ F L Y
Sbjct: 173 KTDAGKLFSTETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLRSLFSLGKRDY 232
Query: 70 PHR 62
PH+
Sbjct: 233 PHK 235
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
GTV ILLAG H GKRV+ + L SGLLLVTGPF +N P
Sbjct: 94 GTVLILLAGPHKGKRVIFLKALKSGLLLVTGPFKYNGVP 132
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = -1
Query: 402 FCFQFVPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKK 280
F + VP+RR+ Q YVI TSTRI + F +PKH +D+YF++
Sbjct: 126 FKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYFRR 166
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
LK G V ILL G + GKRVVL+ +L SGLLLVTGPF+FN P
Sbjct: 44 LKPGAVLILLTGSYKGKRVVLLKVLKSGLLLVTGPFSFNGVP 85
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N P
Sbjct: 39 LQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGVP 80
Score = 41.1 bits (92), Expect = 0.025
Identities = 18/47 (38%), Positives = 31/47 (65%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTANA 247
VPVRR+ Y+I TST++ + + K F D+YFK ++ +K++ +A
Sbjct: 79 VPVRRVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDA 124
Score = 40.7 bits (91), Expect = 0.033
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = -3
Query: 256 SKRKEGDDIFATKKEKY----VPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFG 89
SK K+ D F + E+ V SE+RK Q+ +D ++I +I + P ++ YLK F
Sbjct: 116 SKLKKSKDAFMDQGEETKVNRVVSEERKKTQQALDASIIPSIQSNP---LMMSYLKTRFT 172
Query: 88 LRSSQYPHR 62
L S +PH+
Sbjct: 173 LTSGMFPHK 181
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = -3
Query: 253 KRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 74
K+K +D+F E+ PSEQR DQK VD+ ++ I A P+ ++ YL + F LR Q
Sbjct: 181 KKKRSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPN---MKKYLSSLFSLRKGQ 237
Query: 73 YPH 65
+PH
Sbjct: 238 FPH 240
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
GTV ILLAG H GKRVV + L SGLLLVTGPF N P
Sbjct: 103 GTVLILLAGAHRGKRVVFLKQLNSGLLLVTGPFKINGVP 141
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKH-FNDD-YFKKNKKCVKRT 256
VP+RRIPQ YVI TST I + + KLP+H F D+ YFK K KR+
Sbjct: 140 VPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESYFKGEPKKKKRS 185
Score = 41.5 bits (93), Expect = 0.019
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -3
Query: 649 KQIGGEKNGGTRTVPLKRRKSFYPTQE 569
K IGG+KNGG R VP++R +YPT++
Sbjct: 54 KDIGGDKNGGKRVVPVQRESRYYPTED 80
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
G V ILLAGRH KRVV + L SGLLLVTGPF +N P
Sbjct: 100 GKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVP 138
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -1
Query: 402 FCFQFVPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTAN 250
F + VP+RR+ QRYVI T TRI + N K+P ND++F++ K++ +
Sbjct: 132 FKYNGVPLRRVNQRYVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSVD 182
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -3
Query: 268 RQTYSKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKA 146
RQ +K D IFA +++KY S+ RK QK VD A+I A
Sbjct: 172 RQDLKTKKSVDKIFAEEEKKYTVSDDRKKLQKQVDTALIAA 212
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
GTV ILLAGR GKRVV + L SGLLLVTGPF N P
Sbjct: 81 GTVLILLAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVP 119
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = -3
Query: 256 SKRKEGDDIFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLR 83
+K+ EG+ +F T+KE K +P E +K DQK VD +IKAI A PD L+ YL A F LR
Sbjct: 158 AKKTEGE-LFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPD---LKTYLGARFSLR 212
Query: 82 SSQYPH 65
PH
Sbjct: 213 DGDKPH 218
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKK 271
VP+RR+ Q YVI TST++ + + K F+D YF ++KK
Sbjct: 118 VPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYFSRDKK 155
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
GTV ILLAGR GKRVVL+ L G+LLVTGPF N P
Sbjct: 42 GTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVP 80
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
GTV I+LAGR AGKRVV + L SGL+L+TGPF N P
Sbjct: 94 GTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVP 132
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTANA 247
VP+RRI QRYVI TST+I + + K+ ND YF KK ++ A
Sbjct: 131 VPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKSTTKSEGA 177
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = -3
Query: 220 KKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHR 62
K EK ++ R DQK+VD A++ + +K L YLK F L+ ++PH+
Sbjct: 184 KAEKKKIADSRVADQKSVDSAILAVL---KKEKFLTVYLKTKFYLKKGEFPHQ 233
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
GTV I+LAGR GKRVV + L SGLLLVTGPF N P
Sbjct: 92 GTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVP 130
Score = 50.0 bits (114), Expect = 5e-05
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = -3
Query: 274 EVRQTYSKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAA 95
+V + K+ EG+ A K+EK + +K DQK VD A+IKAI A P+ L+ YL A
Sbjct: 163 KVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPE---LKTYLGAR 219
Query: 94 FGLRSSQYPH 65
F L+ PH
Sbjct: 220 FSLKQGMKPH 229
Score = 42.3 bits (95), Expect = 0.011
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF-----KKNKKCVKRTANA-KRVMTSL 226
VP+RR+ Q YVIGTST++ + L K F+D YF KK KK A K +
Sbjct: 129 VPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEI 187
Query: 225 PQKKRN 208
PQ K++
Sbjct: 188 PQGKKD 193
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
L+ GT+ ILLAGR GKRV+L+ L G+LLVTGPF N P
Sbjct: 58 LQPGTILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVP 99
Score = 39.1 bits (87), Expect = 0.10
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -3
Query: 256 SKRKEGDDIF---ATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 86
+++K+G++ F K EK + R DQK +D+A++ I P L YL + F L
Sbjct: 139 AEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQALLATIKKEP---FLGSYLASTFSL 195
Query: 85 RSSQYPH 65
R+ PH
Sbjct: 196 RTGDKPH 202
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNF---KLPKHFNDDYFKKNKKCVKRTANAKRVMTSLPQK 217
VP+RR+ RYVI TS+ + L L K +YF + K K+ A P+K
Sbjct: 98 VPLRRVNARYVIATSSTVDLNGVDQKTLEKVSQPEYFTREKAEQKKGEEAFFKQGEKPEK 157
Query: 216 KR 211
K+
Sbjct: 158 KK 159
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = -2
Query: 494 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
TV I+L GRH GKRVV + L SGLLLVTGP A N P
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVP 50
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
G V ILL+GR GKRVV + L SGLLLVTGPF N P
Sbjct: 61 GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVP 99
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNK 274
VP++R+ YVI TST++ + NDDYFK+ +
Sbjct: 98 VPLKRVNSAYVIPTSTKVDVTGVN-ANQINDDYFKRTQ 134
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = -3
Query: 217 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHR 62
KEKY +EQRK DQK VD ++ + P LRGYL+++F L YPH+
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLRSSFCLSGGVYPHK 51
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
+++G V I+L G+H GKR ++ +L SGLL V GP+ N P
Sbjct: 74 IQVGKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVP 115
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
+K GT+ ILLAG G RVV++ L SG LLVTGP+A N P
Sbjct: 72 IKSGTIVILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIP 113
Score = 39.5 bits (88), Expect = 0.076
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -3
Query: 673 PKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEK 566
P+ + ++ K IGG KNGG R VP K+ +YP +K
Sbjct: 17 PEPIKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDK 52
Score = 38.7 bits (86), Expect = 0.13
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = -3
Query: 253 KRKEGD--DIFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 86
K+K+ D ++ KK+ K E R DQK +D ++ I P +L YLK F L
Sbjct: 149 KKKKTDVMEVDTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP---LLSSYLKVKFSL 205
Query: 85 RSSQYPH 65
+ QYPH
Sbjct: 206 KKGQYPH 212
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTANAKRVMTSLPQKKR 211
+P+ R+ QRYVI TST I + + K ++ YF+K +K K+ + V T+ +++
Sbjct: 112 IPLTRVDQRYVIATSTSIDVSKVDV-KKIDNAYFRKPQK--KKKTDVMEVDTAKKDEQK 167
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCP 381
GTV ILLAGR GKRVV + L LL++GPF N P
Sbjct: 37 GTVLILLAGRFRGKRVVYLKHLEDNTLLISGPFKVNGVP 75
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = -1
Query: 387 VPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNK--KCVKRTAN 250
VP+RR+ RYVI TST++S+ + K FN +YF K K K K+ AN
Sbjct: 74 VPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYFAKEKLTKKEKKEAN 120
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -2
Query: 545 PSIQQACTQDPTH----LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 402
P ++ AC P LK+GTV I++ G H GKR V+V +G++ + GP
Sbjct: 39 PLVKPACAAKPVETRPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGP 90
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 40.7 bits (91), Expect = 0.033
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPYAVFLSAM*SAPPPE 336
GTV I+LAGR VV + L SGLLL+TG F N P++ F S+ + PPE
Sbjct: 235 GTVLIILAGR-----VVFLKQLSSGLLLITGSFKINDVPHS-FASSEATGFPPE 282
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 39.5 bits (88), Expect = 0.076
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -2
Query: 497 GTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCP 381
G + I+LAGR G+R V++ LP +G L+V+GP +N P
Sbjct: 36 GAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVP 75
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 214 EKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHR 62
+K + S+ R QK +D A+I AI K GYL++ F ++ PHR
Sbjct: 142 KKTLVSDARAQLQKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAPHR 192
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = -1
Query: 405 TFCFQFVPVRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRT 256
+F VP+RR+ Q YVI TST++ + + K F+D YF K + +R+
Sbjct: 174 SFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYFAKKVQKKRRS 222
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILP 429
+K G VCI+L GRHAGK+ V+V LP
Sbjct: 6 IKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 37.5 bits (83), Expect = 0.31
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTG 405
+ +G + +++AGR AG++VV+V I+ +LVTG
Sbjct: 4 IDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTG 37
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 35.9 bits (79), Expect = 0.93
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTG 405
+++G VCI AGR AGK V+V IL ++V G
Sbjct: 4 IEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDG 37
>UniRef50_UPI0000D9B719 Cluster: PREDICTED: similar to 60S ribosomal
protein L6 (TAX-responsive enhancer element-binding
protein 107) (TAXREB107) (Neoplasm-related protein
C140); n=1; Macaca mulatta|Rep: PREDICTED: similar to
60S ribosomal protein L6 (TAX-responsive enhancer
element-binding protein 107) (TAXREB107)
(Neoplasm-related protein C140) - Macaca mulatta
Length = 109
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -3
Query: 685 KPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKI 563
K EK K L V K +GG+KNGG V L + ++PT + +
Sbjct: 40 KIEKEKVLATVTKPVGGDKNGGAPVVKL-HKMPYHPTGDVV 79
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 685 KPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSF 584
K +K K + V+K + G+KNGGT V L++ K +
Sbjct: 79 KKKKEKVVATVIKTVSGDKNGGTGVVKLQKMKMY 112
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -2
Query: 494 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 390
TV I++ G+H +RVV + L G LL+TGP A N
Sbjct: 138 TVLIIITGQH--RRVVFLKQLSRGFLLITGPLALN 170
>UniRef50_Q03567 Cluster: Uncharacterized transporter C38C10.2; n=2;
Caenorhabditis|Rep: Uncharacterized transporter C38C10.2
- Caenorhabditis elegans
Length = 493
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -2
Query: 479 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPYAV 372
LA R+ GKRVV V IL S LL + P A + YA+
Sbjct: 104 LASRYGGKRVVFVTILGSALLTLLNPVAARTSEYAL 139
>UniRef50_A4RCU7 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 982
Score = 34.3 bits (75), Expect = 2.9
Identities = 26/76 (34%), Positives = 36/76 (47%)
Frame = -1
Query: 258 TANAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSKRPSDSAR 79
T + M++ T LSSA + Q + + S P +P R S T+ S SA+
Sbjct: 203 TTTSSHTMSAGSSPSMATSRLSSAVA-KGQRSHVPSTPGKPSILARLSQPTA---SSSAK 258
Query: 78 ANIPIGALLNLRIRNK 31
+N P G LNLR R K
Sbjct: 259 SNAPSGRTLNLRSRPK 274
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 506 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 402
+ IG V + + GR AG++ V+V I+ +++TGP
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGP 39
>UniRef50_P09705 Cluster: Uncharacterized protein HHRF4; n=4;
Cytomegalovirus|Rep: Uncharacterized protein HHRF4 -
Human cytomegalovirus (strain AD169) (HHV-5) (Human
herpesvirus 5)
Length = 462
Score = 33.1 bits (72), Expect = 6.6
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -1
Query: 189 AKPIRRQSTRL*SKPSEPDPTRRCSADTSKRPSDSARANIPIGALLNLRIRNKIFD 22
A +R QST + S+P+ P TRR + DTS S S +++ ++ + R +D
Sbjct: 29 APTVRAQSTVVRSEPAPPSETRRDNNDTSYFSSTSFHSSVSPATSVDRQFRRTTYD 84
>UniRef50_P30182 Cluster: DNA topoisomerase 2; n=4; Viridiplantae|Rep:
DNA topoisomerase 2 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 1473
Score = 33.1 bits (72), Expect = 6.6
Identities = 24/65 (36%), Positives = 32/65 (49%)
Frame = -3
Query: 250 RKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 71
+K G ATK K P+ RK ++TV + AIG P+KKV R + F +SS
Sbjct: 1346 KKGGRKPAATKAAK-PPAAPRKRGKQTVASTEVLAIGVSPEKKV-RKMRSSPFNKKSSSV 1403
Query: 70 PHRCA 56
R A
Sbjct: 1404 MSRLA 1408
>UniRef50_UPI0000D9B7E2 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 266
Score = 32.7 bits (71), Expect = 8.7
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 149 SHRSPTRQEGAPRIPQSGLRTPLEPI-SPSVRF 54
+HRSP R GAPR P P P+ SP R+
Sbjct: 147 AHRSPVRSRGAPRTPLPARGPPSPPLRSPGTRY 179
>UniRef50_Q4KT76 Cluster: Hoar peptide; n=1; Chrysodeixis chalcites
nucleopolyhedrovirus|Rep: Hoar peptide - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 1179
Score = 32.7 bits (71), Expect = 8.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 217 FLWQRCHHPLCVCCTFDA 270
F++ C H LC+CCT+D+
Sbjct: 551 FVYPHCEHILCICCTYDS 568
>UniRef50_A5IXJ8 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma agalactiae|Rep: Putative uncharacterized
protein - Mycoplasma agalactiae
Length = 715
Score = 32.7 bits (71), Expect = 8.7
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -1
Query: 306 HFNDDYFKKNKKCVKRTANAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL 157
+ ++DY K N K K K+ +TSL ++ RNT L S P + +L
Sbjct: 386 NLSNDYNKINDKNSKEAVELKKKITSLNEQLRNTSRLLSPAPYSTMTVKL 435
>UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0451700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 180
Score = 32.7 bits (71), Expect = 8.7
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 153 SKPSEPDPTRRCSADTSKRPS 91
++ S P+PTR CSA+ SKRPS
Sbjct: 13 TRSSPPNPTRTCSAEHSKRPS 33
>UniRef50_Q17551 Cluster: E3 ubiquitin-protein ligase rpm-1; n=3;
Caenorhabditis|Rep: E3 ubiquitin-protein ligase rpm-1 -
Caenorhabditis elegans
Length = 3766
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 303 FNDDYFKKNKKCVKRTANAKRVMTSLPQKKRNTFHLSSAK 184
+ND + + V +ANA R+MT LP N HLS+A+
Sbjct: 1874 YNDSTMRLEQDLVWLSANACRIMTQLPINPSNIEHLSTAE 1913
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,931,283
Number of Sequences: 1657284
Number of extensions: 15819475
Number of successful extensions: 53424
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 50727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53357
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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