BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30166 (602 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_1361 - 26398987-26399019,26399320-26399387,26399458-263995... 120 1e-27 09_02_0105 - 4337047-4337079,4337175-4337242,4337323-4337425,433... 113 8e-26 01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 31 0.93 04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 29 2.1 07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 29 3.7 11_03_0158 + 10911997-10912078,10912203-10912288,10913780-109138... 28 6.5 02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 28 6.5 03_02_0983 - 12933082-12934884,12935669-12936487,12936754-129367... 27 8.7 >08_02_1361 - 26398987-26399019,26399320-26399387,26399458-26399560, 26399658-26399888,26400791-26400826,26400891-26400931, 26401028-26401064,26401158-26401160 Length = 183 Score = 120 bits (288), Expect = 1e-27 Identities = 57/90 (63%), Positives = 68/90 (75%) Frame = +3 Query: 243 GSLAKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYM 422 G KSA F+L LL+NAESNAD K LDVD L + HIQVN+A RRRTYRAHGRINPYM Sbjct: 94 GRWPAKSARFILDLLKNAESNADVKGLDVDNLFVSHIQVNQAQKQRRRTYRAHGRINPYM 153 Query: 423 SSPCHIEVCLSEREDAVARVAPTDDAPAKK 512 SSPCH+E+ LSE+E+AV + T AP ++ Sbjct: 154 SSPCHVELILSEKEEAVKKEPETTIAPRRQ 183 Score = 100 bits (240), Expect = 8e-22 Identities = 54/97 (55%), Positives = 64/97 (65%), Gaps = 13/97 (13%) Frame = +1 Query: 4 MGRYSREPDNPAKSCKARGSNLRVHFK------------NTYETAMAIRKMPLRRAVRYL 147 MG+YS EP NP KS KA G +LRVHFK NT ETA A+RK+PL +A RYL Sbjct: 1 MGKYSTEPSNPTKSAKAMGRDLRVHFKVIVFARFVQCCSNTRETAFALRKLPLVKAKRYL 60 Query: 148 KNVIEKKECIPFRRFNGGVGRCAQAK-QFGTTQGRWP 255 ++VI K+ IPFRR+ GGVGR AQ K + QGRWP Sbjct: 61 EDVIAHKQAIPFRRYCGGVGRTAQVKSRQSNGQGRWP 97 >09_02_0105 - 4337047-4337079,4337175-4337242,4337323-4337425, 4337507-4337737,4339307-4339347,4339437-4339473, 4339603-4339605 Length = 171 Score = 113 bits (273), Expect = 8e-26 Identities = 56/91 (61%), Positives = 67/91 (73%) Frame = +3 Query: 243 GSLAKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYM 422 G KSA F+L LL+NAESNA+ K LDVD L + HIQVN+A RRRTYRAHGRINPYM Sbjct: 82 GRWPAKSARFILDLLKNAESNAEVKGLDVDTLYVSHIQVNQAQKQRRRTYRAHGRINPYM 141 Query: 423 SSPCHIEVCLSEREDAVARVAPTDDAPAKKS 515 SSPCHIE+ LSE+E+ V + P A+K+ Sbjct: 142 SSPCHIELILSEKEEPVKK-EPESQIAARKA 171 Score = 113 bits (271), Expect = 1e-25 Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 1/85 (1%) Frame = +1 Query: 4 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 183 M +YSRE +NP KS KA G +LRVHFKNT ETA AIRK+PL +A RYL++VI K+ IPF Sbjct: 1 MVKYSREANNPTKSSKAMGRDLRVHFKNTRETAFAIRKLPLGKAKRYLEDVIAHKQAIPF 60 Query: 184 RRFNGGVGRCAQAK-QFGTTQGRWP 255 RR+ GGVGR AQAK + QGRWP Sbjct: 61 RRYCGGVGRTAQAKSRHSNGQGRWP 85 >01_05_0279 + 20318440-20318688,20318785-20318931,20319449-20319611, 20319770-20319887,20320607-20320676,20320774-20320854, 20320924-20320959,20321129-20321149,20321586-20321642, 20321716-20321827,20321905-20322178,20322454-20322556, 20323244-20323459,20324615-20324665,20325339-20327963 Length = 1440 Score = 30.7 bits (66), Expect = 0.93 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = +3 Query: 246 SLAKKSAEFLLQLLRNAE--SNADNKTLDVDRLVIDHIQVNRAPCLR 380 +L K EF Q+ + +E S + + L + + I H+ + APCLR Sbjct: 1030 ALRKSKEEFFCQVYKGSEACSIENTRRLSIQNVSIQHLSGSSAPCLR 1076 >04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141, 7280242-7280547,7280643-7280857,7281395-7281689, 7281906-7281983,7282070-7282705,7283016-7283102, 7283945-7284265,7285503-7287599 Length = 1483 Score = 29.5 bits (63), Expect = 2.1 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%) Frame = -1 Query: 551 SSPFDAQAFSWKAFFRW--GIISRGYPGDSIFA 459 S+P+DA ++ +A F W ++S+GY DS+ A Sbjct: 229 STPYDAASWLSRATFSWINPLVSKGYASDSLAA 261 >07_03_1445 + 26580293-26580610,26580814-26581314,26581411-26581508, 26581900-26581978,26582065-26582325,26582409-26582576, 26582800-26583237 Length = 620 Score = 28.7 bits (61), Expect = 3.7 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = -2 Query: 286 NNCKRNSADFLASDPVLCQTALLEHSDQRRR*SDGMEYTLSFQSR 152 N+ + D LAS+ ++ +TA+L D + M++T SF+ R Sbjct: 452 NSARFPVVDILASEDIVTETAVLNSFDLATMKENEMDFTSSFELR 496 >11_03_0158 + 10911997-10912078,10912203-10912288,10913780-10913857, 10913967-10914098,10914385-10914435,10914529-10914669, 10914754-10914876,10914989-10915066,10915448-10915541, 10915633-10915739,10915936-10916019,10916649-10916744, 10916835-10917023,10917705-10917780,10918507-10918610, 10918708-10918967,10920000-10920086,10920184-10920411, 10920752-10920826,10921264-10921346,10921552-10921661 Length = 787 Score = 27.9 bits (59), Expect = 6.5 Identities = 14/65 (21%), Positives = 28/65 (43%) Frame = +1 Query: 1 IMGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIP 180 ++ + + + K C RGS +R+H KN + P RR + +++ + I Sbjct: 530 VLAKMAERDEGTLKDCAQRGSFVRLHLKNVPTEIASKLVHPSRRLPVVVSGLLQHESKIS 589 Query: 181 FRRFN 195 F+ Sbjct: 590 VLHFS 594 >02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930, 1884442-1884666,1884844-1885224,1885282-1885989, 1886546-1886839,1887211-1887709,1887949-1888721 Length = 1257 Score = 27.9 bits (59), Expect = 6.5 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +3 Query: 453 SEREDAVARVAPTDDAPAKK 512 +E E+A A+ AP +APAKK Sbjct: 20 AEEEEAAAKTAPAAEAPAKK 39 >03_02_0983 - 12933082-12934884,12935669-12936487,12936754-12936795, 12937116-12937244 Length = 930 Score = 27.5 bits (58), Expect = 8.7 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 102 NGNQKDAAPSCCSLPQKRD*KERVYSIPSLQRRRWSLCSSKAVWHNTGSLAK 257 NGN D + PQK ++R Y P +RRR + CS+ + S +K Sbjct: 637 NGNG-DTIGATSFFPQKTKIEKRKYLSPVTKRRRLTSCSNDQTSRRSFSFSK 687 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,528,159 Number of Sequences: 37544 Number of extensions: 345584 Number of successful extensions: 1055 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1028 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1054 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1431112012 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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