Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30164
(763 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 153 5e-36
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 148 2e-34
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 146 7e-34
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 136 7e-31
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 113 3e-24
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 113 5e-24
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 112 8e-24
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 105 1e-21
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 98 2e-19
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 92 1e-17
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 86 8e-16
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 83 6e-15
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 79 9e-14
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 73 6e-12
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 66 9e-10
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 62 2e-08
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 55 2e-06
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 54 4e-06
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 52 2e-05
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 47 4e-04
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 42 0.022
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 41 0.029
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 40 0.051
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 40 0.089
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 38 0.21
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 36 1.1
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 2.5
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 153 bits (371), Expect = 5e-36
Identities = 70/81 (86%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
TCQ+AYSRIEGD I CA H
Sbjct: 61 TCQIAYSRIEGDKILCAAYSH 81
Score = 134 bits (325), Expect = 2e-30
Identities = 59/81 (72%), Positives = 69/81 (85%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 693
AMKGAVDGGLN+PHS KRFPGYDAES+ FNAE HRAHIFG HVA+YM +LE +D ++FKR
Sbjct: 131 AMKGAVDGGLNIPHSTKRFPGYDAESKTFNAEAHRAHIFGQHVADYMHALEDEDAEAFKR 190
Query: 694 QFSKYIKLGVTADAIEASSRK 756
QFS+YIKLG+ AD IE +K
Sbjct: 191 QFSQYIKLGIAADQIETIYKK 211
Score = 60.5 bits (140), Expect(2) = 3e-13
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2
Query: 416 EYNVEPVDNGPGAFRCYLDVGLARTTTGA 502
EYNVE V+NGPGAFRCYLDVGL RTTTGA
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGA 126
Score = 37.5 bits (83), Expect(2) = 3e-13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 254 LCAAYSHELPRYGVK 298
LCAAYSHELPRYGVK
Sbjct: 75 LCAAYSHELPRYGVK 89
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 148 bits (358), Expect = 2e-34
Identities = 68/81 (83%), Positives = 73/81 (90%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 213 TCQVAYSRIEGDH-ICALLIH 272
T Q+AY+RIEGD +CA H
Sbjct: 61 TVQIAYARIEGDRVVCAAYSH 81
Score = 141 bits (342), Expect = 1e-32
Identities = 61/82 (74%), Positives = 74/82 (90%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 690
GAMKGAVDGGLN+PHS+KRFPGY AE++ FNA+VHRAHIFG HVA+YMRSLE++DE+SFK
Sbjct: 161 GAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFK 220
Query: 691 RQFSKYIKLGVTADAIEASSRK 756
RQFS+YIKLG+ AD +E +K
Sbjct: 221 RQFSRYIKLGIRADDLEDIYKK 242
Score = 105 bits (252), Expect = 1e-21
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAYSHELP+YG++VGLTNYAAAY TG E+NVEP
Sbjct: 75 VCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEP 134
Query: 434 VDNGPGAFRCYLDVGLARTTTGA 502
VD+GPGAFRC+LDVGLARTTTGA
Sbjct: 135 VDDGPGAFRCFLDVGLARTTTGA 157
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 146 bits (353), Expect = 7e-34
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 122 bits (294), Expect = 1e-26
Identities = 53/82 (64%), Positives = 69/82 (84%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 690
GA+KGAVDGGL++PHS KRFPGYD+ES++FNAEVHR HI G +VA+YMR L ++DED++K
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYK 220
Query: 691 RQFSKYIKLGVTADAIEASSRK 756
+QFS+YIK VT D +E +K
Sbjct: 221 KQFSQYIKNSVTPDMMEEMYKK 242
Score = 96.7 bits (230), Expect = 6e-19
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 136 bits (328), Expect = 7e-31
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 213 TCQVAYSRIEGDHICA 260
Q+AYS+IEGD + A
Sbjct: 61 VAQLAYSKIEGDVVVA 76
Score = 102 bits (244), Expect = 1e-20
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = +1
Query: 517 MKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQ 696
MKG DGG+NVPHS RF G+D ES+++NAE HR I G HVA+YM L+++DED +KRQ
Sbjct: 162 MKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQ 221
Query: 697 FSKYIKLGVTADAIEASSRK 756
FSK++ G+ AD + A+ +K
Sbjct: 222 FSKFLAAGLNADNLVATYQK 241
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+ +AYSHELPRYG+KVGLTNYAAAY+TG +YNVE
Sbjct: 75 VASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE 134
Query: 434 VDNGPGAFRCYLDVGLARTTTGA 502
+ F+ LD+GLARTTTG+
Sbjct: 135 -EGDRAPFKAVLDIGLARTTTGS 156
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 113 bits (273), Expect = 3e-24
Identities = 48/76 (63%), Positives = 61/76 (80%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 213 TCQVAYSRIEGDHICA 260
CQV Y+ ++GD + A
Sbjct: 61 ICQVIYATLKGDKVVA 76
Score = 62.9 bits (146), Expect = 8e-09
Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 3/56 (5%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAES---RKFNAEVHRAHIFGLHVAEYMRSLEQD 672
A+KGA DGG+++PH+ +RFPG+ ++ K++A VH+ IFG+HV +YM L+++
Sbjct: 157 ALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDRIFGVHVDKYMALLQKE 212
Score = 39.5 bits (88), Expect = 0.089
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTG 337
+ AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 75 VAAAESTELKRFGLTSGLTNYAAAYATG 102
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 113 bits (272), Expect = 5e-24
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 213 TCQVAYSRIEGDHI 254
CQ+A S IEGD I
Sbjct: 61 ICQIASSHIEGDKI 74
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 693
A+KGA DGGLN+PH RFPG +FN E R +I G+HVAEYM S++++D D +K
Sbjct: 165 ALKGACDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGIHVAEYMASMKEEDMDKYKA 221
Query: 694 QFSKYIKLGVTADAIE 741
F+ Y+K + + IE
Sbjct: 222 HFNDYLKHKIDENNIE 237
Score = 42.3 bits (95), Expect = 0.013
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYN 424
L A S EL RYG+ VGL NYAAAY+TG E
Sbjct: 75 LSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDG 134
Query: 425 VEPVDNGPGAFRCYLDVGLARTTTG 499
+ + + +LDVG+ RTTTG
Sbjct: 135 DKEEEGDRKPIKAFLDVGITRTTTG 159
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 112 bits (270), Expect = 8e-24
Identities = 46/74 (62%), Positives = 64/74 (86%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 213 TCQVAYSRIEGDHI 254
Q+ ++I GD +
Sbjct: 84 IAQIVQAKIVGDEV 97
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQD---DED 681
G +KGAVDGG+ VPH RFPGY+ E +A+VHR IFG HVA+Y++ ++++ + D
Sbjct: 190 GVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFGKHVADYLKQVKEEASSNPD 249
Query: 682 SFKRQFSKYIKLGVTADAIEASSRK 756
QFSKY+ V ++IE +K
Sbjct: 250 EKCVQFSKYMAAKVLPESIEGMYKK 274
Score = 54.0 bits (124), Expect = 4e-06
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +2
Query: 260 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 439
AAY+HELP +G++ GLTNYAAAY+TG V
Sbjct: 100 AAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKK 159
Query: 440 NGPG------AFRCYLDVGLARTTTGA 502
+ G F+ LDVGLARTTTGA
Sbjct: 160 DDEGDDEERFPFKAILDVGLARTTTGA 186
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 105 bits (252), Expect = 1e-21
Identities = 56/101 (55%), Positives = 67/101 (66%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 213 TCQVAYSRIEGDHICALLIHMSCHVMV*RLV*QIMLQHIQL 335
T Q+ + I GD I M+C M + V QI Q I L
Sbjct: 72 TAQIISASIAGD---MRPIPMNCLTMGLKWVLQITRQLIVL 109
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 98.3 bits (234), Expect = 2e-19
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +3
Query: 48 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 221
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 222 VAYSRIEGD-HICALLIH 272
V Y+ + GD ICA H
Sbjct: 73 VVYATLSGDVTICAAYSH 90
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAYSHELP+YG+K GLTNYAA Y+TG +Y+VE
Sbjct: 84 ICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQ 143
Query: 434 VDNGPGAFRCYLDVGLARTTTGA 502
D F+C+LD GL RT+TGA
Sbjct: 144 GDEEARPFKCFLDTGLVRTSTGA 166
Score = 68.1 bits (159), Expect = 2e-10
Identities = 27/66 (40%), Positives = 46/66 (69%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 693
A+KGAVDGGL++PH+ KRF GYD + + + + +I G VAEY +++++ + F++
Sbjct: 171 ALKGAVDGGLDIPHNEKRFAGYDLQDKSHDPDTLERYIKGGVVAEYAEEMQEEEPEKFEQ 230
Query: 694 QFSKYI 711
F+KY+
Sbjct: 231 HFAKYL 236
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 92.3 bits (219), Expect = 1e-17
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESRK---FNAEVHRAHIFGLHVAEYMRSLEQDDED 681
GA+KGA DGGL+VPHS KRFPGY + ++A+ HR IFG HVA YM L+++D +
Sbjct: 110 GALKGACDGGLHVPHSEKRFPGYSVDEENNGTYDAQAHRDRIFGAHVASYMEYLKEEDPE 169
Query: 682 SFKRQFSKYIKLGVTADAIE 741
+++QFS Y+K G+ + A+E
Sbjct: 170 RYRKQFSAYLKHGLESSALE 189
Score = 54.0 bits (124), Expect = 4e-06
Identities = 32/80 (40%), Positives = 37/80 (46%)
Frame = +2
Query: 260 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 439
+A S EL YGVKVGLTNYAAAY TG Y+VE +
Sbjct: 26 SADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKLEVDGEVYHVEEEE 85
Query: 440 NGPGAFRCYLDVGLARTTTG 499
N F+ LDVG+ TTG
Sbjct: 86 NERRPFKALLDVGVKNVTTG 105
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 86.2 bits (204), Expect = 8e-16
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 690
GA+K VD GL++PHS K FPGYD+ S++FNAEV+ I G +V +YM L ++DED++K
Sbjct: 83 GALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYMCFLMEEDEDAYK 142
Query: 691 RQFSKYIKLGVTADAIE 741
+Q +YIK +T D +E
Sbjct: 143 KQSLEYIKNNITPDMME 159
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTG 337
+CAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 25 VCAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 83.4 bits (197), Expect = 6e-15
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 45 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 224
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 225 AYSRIEGDH-ICALL 266
+ + GD +C L
Sbjct: 64 VVAELTGDKTVCQAL 78
Score = 66.5 bits (155), Expect = 7e-10
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = +1
Query: 517 MKGAVDGGLNVPHSIKR----FPGYDAESRKFNAEV--------HRAHIFGLHVAEYMRS 660
MKGAVDGGL +PH++ R F D ++ K +V ++ +I G VA+YMR
Sbjct: 157 MKGAVDGGLFIPHNVCRLACKFDKKDKDAGKDRKDVPAEKIVKGNQYYILGGAVADYMRK 216
Query: 661 LEQDDEDSFKRQFSKYIKLGVTADAIE 741
L+++ E+ + +QFS+Y+K G+TAD++E
Sbjct: 217 LKKESEEKYNKQFSRYVKAGITADSLE 243
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/83 (40%), Positives = 43/83 (51%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+C A S ELP+YG+K+GL+NY AAY+TG EY +
Sbjct: 74 VCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKTEITEEYLNDE 130
Query: 434 VDNGPGAFRCYLDVGLARTTTGA 502
+ P F+ LDVGLARTTTGA
Sbjct: 131 ENRRP--FKVILDVGLARTTTGA 151
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGY-----DAESRKFNAEVHRAHIFGLHVAEYMRSLEQDD 675
G +KGA DGG+N+PHS RFPGY + ES K+ E H+A IFG H+ YM+ L+
Sbjct: 450 GVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQS 509
Query: 676 EDSFKRQFSKYIK 714
++F++QFSK+ K
Sbjct: 510 NEAFQKQFSKWSK 522
Score = 74.5 bits (175), Expect = 3e-12
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +3
Query: 84 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI-CA 260
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D + CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/82 (37%), Positives = 38/82 (46%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
LCAA S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 364 LCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDE 423
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
F+ LD GL RTTTG
Sbjct: 424 DQKEKKPFKAILDAGLVRTTTG 445
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 125
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 690
GA+KGA D GLNVPHS +F G+ + F+A+ IFG +++EYM+ L D + +K
Sbjct: 154 GALKGASDAGLNVPHSAAKFYGHKPDG-SFDAKELHDRIFGYNISEYMKQLRDGDPEKYK 212
Query: 691 RQFSKYIKLGVTADAI 738
QFS YIK G+ + I
Sbjct: 213 TQFSSYIKKGIDPEEI 228
Score = 67.7 bits (158), Expect = 3e-10
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +3
Query: 60 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 239
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 240 EGDHI 254
+GD +
Sbjct: 64 DGDRV 68
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 263 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVD 439
A S EL RYG+ G TNY+AAY+TG Y+V + +D
Sbjct: 72 ADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGTYSVTKDID 129
Query: 440 NGPGAFRCYLDVGLARTTTGA 502
A R +LD+GLAR+T GA
Sbjct: 130 GEKKAPRVFLDIGLARSTRGA 150
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 66.1 bits (154), Expect = 9e-10
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +3
Query: 57 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 236
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 237 IEGDHI 254
++GD I
Sbjct: 69 VDGDFI 74
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/64 (31%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAESRKFNA-EVHRAHIFGLHVAEYMRSLEQDDEDSFK 690
+MKG+VD G+N+PH+ + + ++ + ++ E+ G+H+ +Y+ L+ +DE+ K
Sbjct: 148 SMKGSVDSGINIPHNYNKI--FKVKNNEIDSKELFNERSKGIHIIKYIDLLKNEDEEKLK 205
Query: 691 RQFS 702
+QFS
Sbjct: 206 KQFS 209
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 61.7 bits (143), Expect = 2e-08
Identities = 45/131 (34%), Positives = 60/131 (45%)
Frame = +3
Query: 81 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHICA 260
+++F+R +EGKTDYYARKRL +QDKN+YNTP+ + + C
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPEXDDSSCNXQRYHLPDCIXKKFXSSVPC- 94
Query: 261 LLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDCFKDLDLTPYTLAQQMSQVMNTMLNLST 440
+HM MV +L IMLQ I L C L T A+ +NTM T
Sbjct: 95 --MHMKFQNMVXKLAXNIMLQPIALACCWPAGFXIGLAWTRSMKAKWRXMEVNTMWKALT 152
Query: 441 MDQEHLDVIWM 473
+ IWM
Sbjct: 153 VSLVPSLAIWM 163
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +1
Query: 586 ESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEASSRK 756
+S++ +AEVHR +I+G HVA YM L +D+ + ++ FS YIK + D IE +K
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKK 60
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 54.0 bits (124), Expect = 4e-06
Identities = 21/52 (40%), Positives = 38/52 (73%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLE 666
G +K A+DG LN+PH+ +RF G ++++ +A+VHR I+G +V+ Y+ +L+
Sbjct: 74 GVLKEALDGSLNIPHNDRRFVGSSKDNKQLDAKVHRKSIYGGYVSAYIETLK 125
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = +3
Query: 75 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 254
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 255 CA 260
A
Sbjct: 59 IA 60
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 693
A+KGA+D G+ +PHS + PG + E H+A++ +L++++ + ++R
Sbjct: 120 ALKGALDAGVEIPHSEEILPG----DERVRCE---------HIAQWAEALKEENAELYQR 166
Query: 694 QFSKYIKLGVTADAI 738
QFS+Y+ G+ + +
Sbjct: 167 QFSRYLDRGLNPEEL 181
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +3
Query: 75 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 248
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLL-----SSGTP--RMVVRKTNRQIIVQLVVPEVEGD 56
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.5 bits (93), Expect = 0.022
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +3
Query: 75 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 248
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGD 56
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.1 bits (92), Expect = 0.029
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = +3
Query: 75 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 254
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 255 CA 260
A
Sbjct: 59 LA 60
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 40.3 bits (90), Expect = 0.051
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 78 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 248
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGD 56
Score = 36.7 bits (81), Expect = 0.63
Identities = 23/74 (31%), Positives = 42/74 (56%)
Frame = +1
Query: 517 MKGAVDGGLNVPHSIKRFPGYDAESRKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQ 696
+KGA+D GL +PH+ P +SR I G H+A+Y S++ D++++ +
Sbjct: 120 LKGALDAGLYIPHNDSILP---EDSR----------IRGEHIAQYAESMDDDEKNA---K 163
Query: 697 FSKYIKLGVTADAI 738
F+ YI+ G++ + I
Sbjct: 164 FANYIRCGLSPEEI 177
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 39.5 bits (88), Expect = 0.089
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 72 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 251
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 252 I 254
+
Sbjct: 58 V 58
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 38.3 bits (85), Expect = 0.21
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 206
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 207 DVTCQVAYSRIEGDHICA 260
+++ + +S + GD I A
Sbjct: 59 NLSGVITFSSLSGDTIVA 76
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +3
Query: 93 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 254
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH+
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHV 54
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 213 TCQVA 227
C +A
Sbjct: 161 QCSLA 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,814,325
Number of Sequences: 1657284
Number of extensions: 14546033
Number of successful extensions: 34578
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 33365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34544
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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