Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30163
(544 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 26 0.29
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 26 0.29
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 0.87
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 24 1.2
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 1.5
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 2.7
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 3.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 3.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 3.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 3.5
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 6.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.1
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 25.8 bits (54), Expect = 0.29
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 96 FHVCGTCKRTSPWCRCGNPW 37
F++ + + PW CGNPW
Sbjct: 124 FYLLVSLRIDLPWRTCGNPW 143
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 25.8 bits (54), Expect = 0.29
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 96 FHVCGTCKRTSPWCRCGNPW 37
F++ + + PW CGNPW
Sbjct: 177 FYLLVSLRIDLPWRTCGNPW 196
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 0.87
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 469 DGFLSSTDDVGSFRGSW 419
DG SS D GS GSW
Sbjct: 1064 DGITSSGSDSGSSNGSW 1080
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 23.8 bits (49), Expect = 1.2
Identities = 12/69 (17%), Positives = 26/69 (37%)
Frame = -3
Query: 269 REHACDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHVRGERNSSM 90
+ + CD +S + H L V + CT+ + + + H++ +SS+
Sbjct: 230 KPYTCDICGKSFGYN--HVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSDSSV 287
Query: 89 CAEPASEQV 63
P +
Sbjct: 288 VGSPRDSPI 296
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.4 bits (48), Expect = 1.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 35 LQGLPQRHQGLVRLQVPHTWNYSALHVHESVQSWRHCRHQR 157
+Q QRHQ ++ H ++ LH++ S S + + Q+
Sbjct: 789 VQQSQQRHQHAAQMIYGHQQSHHGLHINSSPSSVQSGQQQQ 829
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 22.6 bits (46), Expect = 2.7
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 245 CDCHKRVRGRIIPKRINIRVEHVKHSKCRQD--FLKRVKENERLLKE 379
C+ KRV + R + + H +HSK Q +++++E ER +E
Sbjct: 35 CNICKRVYSSLNSLRNHKSIYHRQHSKNEQQRKEMEQMREREREQRE 81
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 3.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 146 RHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSR 244
R Q+ + + Y WK+RSR + + SR
Sbjct: 45 REQKSYKNENSYRKYRETWKERSRDRTERERSR 77
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 3.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 146 RHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSR 244
R Q+ + + Y WK+RSR + + SR
Sbjct: 45 REQKSYKNENSYRKYRETWKERSRDRTERERSR 77
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 3.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 146 RHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSR 244
R Q+ + + Y WK+RSR + + SR
Sbjct: 45 REQKSYKNENSYRKYRETWKERSRDRTERERSR 77
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 3.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 146 RHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSR 244
R Q+ + + Y WK+RSR + + SR
Sbjct: 45 REQKSYKNENSYRKYRETWKERSRDRTERERSR 77
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -3
Query: 152 DVYNVSNFVHFHVRGERNSSMCAEPASEQVPGAAAVT 42
++YN S+ + ++RGE S+ + VP +T
Sbjct: 376 NIYNASSRMENNLRGETQSNYREMEKRQSVPANDLLT 412
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 155 RQWCSSKGYATQSIPWKDRSRV 220
R C GY +SI W+ +RV
Sbjct: 509 RVTCPVAGYPIESIVWERDTRV 530
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,185
Number of Sequences: 438
Number of extensions: 3048
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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