Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30162
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   4.6  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   6.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   6.1  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   6.1  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   6.1  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   6.1  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   6.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.1  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 549 PSRADVLIVHSIARLCSPG 493
           P + +  IVH IA L SPG
Sbjct: 395 PQQVEAAIVHLIANLPSPG 413


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -2

Query: 247 PLR--SEKLGPRRKASVFKTRGRPTWVLSDHG 158
           PLR  + K+  +R    F    +P  VLSDHG
Sbjct: 234 PLRKATAKIAAKRLIEDFSGYIKPKCVLSDHG 265


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 603 DFTIHSPFSFITDKNQQGAHY 665
           DFT+ +  +F++ +  QGA Y
Sbjct: 73  DFTVQNILTFLSCRFHQGASY 93


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = +1

Query: 253 LTQVAIXRDYYRTKKKHNKTEITKRNKTNK 342
           L   ++ R Y +++ +HN++   ++ KT +
Sbjct: 194 LNSKSLPRQYSQSRGRHNQSRSKRQPKTGR 223


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 247 VLLTQVAIXRDYYRTKKKHNKT 312
           +L T     R+ +RT K HNKT
Sbjct: 382 LLETDNFFLREIWRTVKYHNKT 403


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 247 VLLTQVAIXRDYYRTKKKHNKT 312
           +L T     R+ +RT K HNKT
Sbjct: 382 LLETDNFFLREIWRTVKYHNKT 403


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 247 VLLTQVAIXRDYYRTKKKHNKT 312
           +L T     R+ +RT K HNKT
Sbjct: 382 LLETDNFFLREIWRTVKYHNKT 403


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 247 VLLTQVAIXRDYYRTKKKHNKT 312
           +L T     R+ +RT K HNKT
Sbjct: 382 LLETDNFFLREIWRTVKYHNKT 403


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 247 VLLTQVAIXRDYYRTKKKHNKT 312
           +L T     R+ +RT K HNKT
Sbjct: 381 LLETDNFFLREIWRTVKYHNKT 402


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 450 TTNTGRANNGRANKSRANKDG 512
           T N   ANN    KSR   DG
Sbjct: 321 TQNATPANNNDKRKSRGEVDG 341


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 450 TTNTGRANNGRANKSRANKDG 512
           T N   ANN    KSR   DG
Sbjct: 321 TQNATPANNNDKRKSRGEVDG 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,580
Number of Sequences: 336
Number of extensions: 3146
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)