Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30162
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    25   2.5  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   3.3  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.4  
Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase pr...    24   5.9  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   7.7  

>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 244 AVLLTQVAIXRDYY--RTKKKHNKTEITKRNKTNKYLQETTLSAD 372
           A LL   A+   Y+  R KKK  K +  +R    K  + +T SAD
Sbjct: 298 AALLEYAAVNYTYWGARAKKKSKKNKEAERKVFGKTEKTSTCSAD 342


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 419 LPERALSRQMYHKHRPREQWPG*QKPGEQRR 511
           LP+++  RQ    HR  +QWP  Q+ G+Q++
Sbjct: 259 LPQQSAQRQP--AHRQHQQWPH-QQNGQQQQ 286


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 94  EGQKLRGELXVAKSEEFREYSVHDR*VPRWGGPG 195
           E QK RGEL ++   +     ++D   P + GPG
Sbjct: 136 ETQKRRGELVLSTFAQIDAILLNDGSTPTYVGPG 169


>Z49832-1|CAA89993.1|  155|Anopheles gambiae serine proteinase
           protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 272 GAITTGQRKSTTKQKLRKETKQINTCRKPL 361
           GA+  G+R S+T QK++ +      C K L
Sbjct: 95  GALGFGERLSSTLQKIQLQALDETICAKRL 124


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 566 HSDRGTRHVRTCSSSTRSPVFV 501
           H  RG+RH R  S ++  P F+
Sbjct: 834 HPPRGSRHTRQGSEASSPPPFL 855


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,629
Number of Sequences: 2352
Number of extensions: 14404
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)