BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30161 (776 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 117 2e-27 SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 111 8e-26 SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 109 4e-25 SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 91 2e-19 SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 85 1e-17 SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 78 1e-15 SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 61 2e-10 SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 45 1e-05 SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 31 0.14 SPAC343.14c |||translation initiation factor eIF2B|Schizosacchar... 27 3.0 SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 6.9 >SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual Length = 201 Score = 117 bits (282), Expect = 2e-27 Identities = 59/98 (60%), Positives = 66/98 (67%) Frame = +1 Query: 472 T*DN*ELLSTSSEPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFK 651 T +N L+T + G GY+GS FHRVI NFMIQ +SIYG RF DENFK Sbjct: 55 TAENFRALATGEK--GFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFK 112 Query: 652 LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHL 765 L H G LSMANAG D+NGSQFFITTVKTPWLDG H+ Sbjct: 113 LSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHV 150 Score = 65.7 bits (153), Expect = 7e-12 Identities = 30/54 (55%), Positives = 39/54 (72%) Frame = +2 Query: 377 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKGA 538 +GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G G +G+ Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGS 74 >SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual Length = 162 Score = 111 bits (268), Expect = 8e-26 Identities = 52/84 (61%), Positives = 59/84 (70%) Frame = +1 Query: 514 EGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 693 +G GY GS FHRVI FM+Q +SIYGE+F DENF LKH G LSMANA Sbjct: 42 KGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANA 101 Query: 694 GKDTNGSQFFITTVKTPWLDGRHL 765 G +TNGSQFFITTV TPWLDG+H+ Sbjct: 102 GPNTNGSQFFITTVVTPWLDGKHV 125 Score = 33.1 bits (72), Expect = 0.046 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 407 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKGAS 541 FD+ +G IV LF VPKT NF L +G G G++ Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGST 50 >SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual Length = 356 Score = 109 bits (262), Expect = 4e-25 Identities = 52/80 (65%), Positives = 59/80 (73%) Frame = +1 Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705 YKGS+FHRVIKNFM+Q SIYGE+FEDENF+LKH LSMANAG +T Sbjct: 51 YKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNT 110 Query: 706 NGSQFFITTVKTPWLDGRHL 765 NGSQFFITTV TP LDG+H+ Sbjct: 111 NGSQFFITTVPTPHLDGKHV 130 Score = 27.1 bits (57), Expect = 3.0 Identities = 17/43 (39%), Positives = 19/43 (44%) Frame = +2 Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRG 526 K+S D KI TI LF VPKT +NF L G Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDG 46 >SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 173 Score = 91.1 bits (216), Expect = 2e-19 Identities = 48/94 (51%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Frame = +1 Query: 487 ELLSTSSEPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLKHY 663 E L + +P G YK S FHR+I+ FMIQ +I+ R F DENF LKH Sbjct: 44 ETLGVNQKPIG--YKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHD 101 Query: 664 GAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHL 765 G LSMANAGKD+NG QFFITTV +LDG+H+ Sbjct: 102 RPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHV 135 Score = 30.3 bits (65), Expect = 0.32 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +2 Query: 401 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQ 499 V D+ I +G I I LF VPKT ENF Q Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQ 39 >SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 155 Score = 85.0 bits (201), Expect = 1e-17 Identities = 44/80 (55%), Positives = 52/80 (65%), Gaps = 1/80 (1%) Frame = +1 Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKD 702 Y G FHRVI +F+IQ SIYG++F+DE + L H GAG LSMANAG + Sbjct: 38 YDGVIFHRVIPDFVIQGGDPTGTGRGGT-SIYGDKFDDEIHSDLHHTGAGILSMANAGPN 96 Query: 703 TNGSQFFITTVKTPWLDGRH 762 TN SQFFIT TPWLDG+H Sbjct: 97 TNSSQFFITLAPTPWLDGKH 116 Score = 28.3 bits (60), Expect = 1.3 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +2 Query: 431 NIGTIVIGLFGKTVPKTTENFFQLAQ 508 ++G I+I L+ + PKT +NF+ LA+ Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK 34 >SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp9|Schizosaccharomyces pombe|chr 3|||Manual Length = 610 Score = 78.2 bits (184), Expect = 1e-15 Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 1/88 (1%) Frame = +1 Query: 502 SSEPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWL 678 ++ E Y + FHR+IKNFMIQ SI+ + FEDE + LKH + Sbjct: 483 TTHAENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ESIWKKDFEDEISPNLKHDRPFTV 541 Query: 679 SMANAGKDTNGSQFFITTVKTPWLDGRH 762 SMAN+G +TNGSQFFITT TPWLDG+H Sbjct: 542 SMANSGPNTNGSQFFITTDLTPWLDGKH 569 >SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual Length = 516 Score = 60.9 bits (141), Expect = 2e-10 Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Frame = +1 Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFK-LKHYGAGWLSMANAGKD 702 Y+ + FHR I FMIQ +SI+G+ F+DE LKH G +SMAN GK+ Sbjct: 312 YRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370 Query: 703 TNGSQFFITTVKTPWLDGRH 762 TNGSQFFI LD +H Sbjct: 371 TNGSQFFILYGPAKHLDNKH 390 >SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr 2|||Manual Length = 463 Score = 44.8 bits (101), Expect = 1e-05 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +1 Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENF-KLKHYGAGWLSMANAGKD 702 Y G+ HRV+ F+IQ SIYGE F E +L+ G + MA + Sbjct: 49 YDGTIVHRVVPEFLIQGGDPTGTGMGG-ESIYGEPFAVETHPRLRFIRRGLVGMACTENE 107 Query: 703 TNGSQFFITTVKTPWLDGR 759 N SQFFIT TP +G+ Sbjct: 108 GNNSQFFITLGPTPEWNGK 126 >SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating transcription Rct1|Schizosaccharomyces pombe|chr 2|||Manual Length = 432 Score = 31.5 bits (68), Expect = 0.14 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 425 DDNIGTIVIGLFGKTVPKTTENFFQLAQ 508 + +G +VI LF K PKT ENF +L + Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCK 33 >SPAC343.14c |||translation initiation factor eIF2B|Schizosaccharomyces pombe|chr 1|||Manual Length = 393 Score = 27.1 bits (57), Expect = 3.0 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -3 Query: 516 LRF*AS*KKFSVVLGTVFPNN 454 LRF A +KFSV++ FPNN Sbjct: 218 LRFAAKKRKFSVIVAEGFPNN 238 >SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces pombe|chr 1|||Manual Length = 4924 Score = 25.8 bits (54), Expect = 6.9 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -3 Query: 423 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 280 PIF KL + +TLG L ISS + + KA V ++ TS + FL Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,087,716 Number of Sequences: 5004 Number of extensions: 61243 Number of successful extensions: 175 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 169 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 375345278 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -