Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30161
(776 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 118 5e-27
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 111 8e-25
09_06_0359 + 22508900-22509439 108 6e-24
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 102 3e-22
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 100 1e-21
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 100 3e-21
02_01_0160 + 1116160-1116678 97 1e-20
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 95 6e-20
10_01_0309 + 3417602-3418147 86 3e-17
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 84 1e-16
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 82 4e-16
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 78 9e-15
06_01_0214 + 1634171-1634173,1634263-1634742 71 1e-12
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 70 2e-12
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 64 1e-10
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 57 1e-08
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 57 2e-08
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 45 8e-05
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 40 0.002
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 36 0.027
08_02_0053 + 11721658-11721689,11721960-11722710 31 1.3
10_01_0310 + 3425099-3425218 29 5.4
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 118 bits (284), Expect = 5e-27
Identities = 55/84 (65%), Positives = 62/84 (73%)
Frame = +1
Query: 514 EGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 693
+G GYKGS FHRVIK+FMIQ +SIYG F+DENFKL H G G +SMANA
Sbjct: 126 KGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANA 185
Query: 694 GKDTNGSQFFITTVKTPWLDGRHL 765
G +TNGSQFFI TVKTPWLDGRH+
Sbjct: 186 GPNTNGSQFFICTVKTPWLDGRHV 209
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Frame = +2
Query: 344 FIASAKSD--EIPKGPKVTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQ 508
F++SA +D E+ K+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCT 123
Query: 509 NLRGRGTKGAS 541
+G G KG+S
Sbjct: 124 GEKGFGYKGSS 134
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 111 bits (266), Expect = 8e-25
Identities = 50/80 (62%), Positives = 58/80 (72%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
+KGS FHR+I +FMIQ SIYG +F DENFK+KH G G LSMANAG+DT
Sbjct: 102 FKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGRDT 161
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFITTV T WLDG+H+
Sbjct: 162 NGSQFFITTVTTSWLDGKHV 181
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/65 (47%), Positives = 39/65 (60%)
Frame = +2
Query: 341 LFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRG 520
L +A AK + +VTHKV FD++I G +V+GLFGKTVPKT ENF L +G
Sbjct: 34 LALAQAKKSKADL-TEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKG 92
Query: 521 RGTKG 535
G G
Sbjct: 93 TGKSG 97
>09_06_0359 + 22508900-22509439
Length = 179
Score = 108 bits (259), Expect = 6e-24
Identities = 49/80 (61%), Positives = 56/80 (70%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKGS FHR+I NFM Q SIYG+RF DENFKL+H G G LSMANAG +T
Sbjct: 57 YKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNT 116
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFI T +T WLDG+H+
Sbjct: 117 NGSQFFICTTRTTWLDGKHV 136
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +2
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKG 535
KV FD+ IG G +V+ LF TVPKT ENF L +G G G
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASG 52
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 102 bits (245), Expect = 3e-22
Identities = 54/89 (60%), Positives = 58/89 (65%)
Frame = +1
Query: 472 T*DN*ELLSTSSEPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFK 651
T DN L T + G GYKG FHR+IK+FMIQ RSIYGE F+DENF
Sbjct: 94 TVDNFRALCTGDK--GYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFDDENFT 151
Query: 652 LKHYGAGWLSMANAGKDTNGSQFFITTVK 738
LKH G G LSMANAG DTNGSQFFI TVK
Sbjct: 152 LKHTGPGVLSMANAGPDTNGSQFFICTVK 180
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +2
Query: 386 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKGAS 541
KV K FD+++G + G IVIGLFG+ VPKT +NF L +G G KG S
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCS 114
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 100 bits (239), Expect = 1e-21
Identities = 47/79 (59%), Positives = 53/79 (67%)
Frame = +1
Query: 529 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTN 708
KGS HR++K FM+Q SIYG FEDENF LKH G LSMANAG DTN
Sbjct: 100 KGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTN 159
Query: 709 GSQFFITTVKTPWLDGRHL 765
GSQFFITT +TP LDG+H+
Sbjct: 160 GSQFFITTTRTPHLDGKHV 178
Score = 35.5 bits (78), Expect = 0.047
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +2
Query: 311 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 490
GT T A +A+ K +E + D+ IG D G IV+ L+ P+T EN
Sbjct: 7 GTTTAAAAAA--VAAGKEEEAEVVVVRNPRCYLDVSIGGDMEGRIVVELYASVAPRTAEN 64
Query: 491 FFQLAQNLRG 520
F L +G
Sbjct: 65 FRALCTGEKG 74
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 99.5 bits (237), Expect = 3e-21
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = +1
Query: 529 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTN 708
+GS FHRVIK FM+Q SIYG +FEDENF LKH G LSMAN+G +TN
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTN 177
Query: 709 GSQFFITTVKTPWLDGRHL 765
GSQFFITT +TP LDG+H+
Sbjct: 178 GSQFFITTTRTPHLDGKHV 196
Score = 35.9 bits (79), Expect = 0.036
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 347 IASAKSDEIP-KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGR 523
+ASA + E+ K P+ D+ IG + G IVI L+ VP+T ENF L +G
Sbjct: 13 VASAAAAEVEVKNPRCF----MDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGV 68
Query: 524 G 526
G
Sbjct: 69 G 69
>02_01_0160 + 1116160-1116678
Length = 172
Score = 97.5 bits (232), Expect = 1e-20
Identities = 47/80 (58%), Positives = 51/80 (63%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKGS FHRVI FM Q SIYGE+F DE FK KH G LSMANAG +T
Sbjct: 55 YKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNT 114
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFI TV WLDG+H+
Sbjct: 115 NGSQFFICTVPCSWLDGKHV 134
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +2
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKG 535
+V FDM +G G IV+ L+ K VP+T ENF L +G G G
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSG 50
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 95.1 bits (226), Expect = 6e-20
Identities = 46/80 (57%), Positives = 51/80 (63%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKG+ FHR+I FMIQ SIYG F DENFK+ H G LSMAN KDT
Sbjct: 91 YKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDT 150
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFITTVK LDG+H+
Sbjct: 151 NGSQFFITTVKLTRLDGKHV 170
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +2
Query: 386 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKG 535
KVT KV FD+ I G IV+GLFG TVPKT ENF + +G G G
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSG 86
>10_01_0309 + 3417602-3418147
Length = 181
Score = 85.8 bits (203), Expect = 3e-17
Identities = 43/83 (51%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIY---GERFEDENFKLKHYGAGWLSMANAG 696
YKGS FHRV+ FM Q S F DE F +KH G G +SMANAG
Sbjct: 62 YKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAG 121
Query: 697 KDTNGSQFFITTVKTPWLDGRHL 765
+TNGSQFFIT K PWLDGRH+
Sbjct: 122 PNTNGSQFFITVDKAPWLDGRHV 144
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 83.8 bits (198), Expect = 1e-16
Identities = 44/76 (57%), Positives = 46/76 (60%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKGS FHRVIK FM Q SIYG FEDENF L+H G LSMANAG +T
Sbjct: 59 YKGSLFHRVIKGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNT 118
Query: 706 NGSQFFITTVKTPWLD 753
NGSQFFIT LD
Sbjct: 119 NGSQFFITFKHNSRLD 134
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 401 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRG 526
V D+ IGD+ +V LF P+T ENF L G G
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIG 50
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 82.2 bits (194), Expect = 4e-16
Identities = 45/80 (56%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFK-LKHYGAGWLSMANAGKD 702
Y FHRVIK FMIQ +SI+G FEDE K L+H LSMANAG +
Sbjct: 532 YDNLIFHRVIKGFMIQTGDPLGDGTGG-QSIWGREFEDEFHKSLRHDRPFTLSMANAGPN 590
Query: 703 TNGSQFFITTVKTPWLDGRH 762
TNGSQFFITTV TPWLD +H
Sbjct: 591 TNGSQFFITTVATPWLDNKH 610
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 77.8 bits (183), Expect = 9e-15
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKD 702
Y FHR+IK+F++Q SIYG +FEDE +LKH GAG LSMANAG +
Sbjct: 46 YDNVIFHRIIKDFIVQGGDPTGTGRGG-ESIYGAKFEDEIRPELKHTGAGILSMANAGPN 104
Query: 703 TNGSQFFITTVKTPWLDGRH 762
TNGSQFFIT LDG+H
Sbjct: 105 TNGSQFFITLAPCQSLDGKH 124
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 70.5 bits (165), Expect = 1e-12
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKD 702
Y G+ FHR IK FMIQ SI+G++F DE LKH G +SMAN+G +
Sbjct: 37 YDGTIFHRNIKGFMIQGGDPTGTGKGGT-SIWGKKFADEFRESLKHNARGVMSMANSGPN 95
Query: 703 TNGSQFFITTVKTPWLDGRH 762
TNGSQFFIT K P L+G +
Sbjct: 96 TNGSQFFITYAKQPHLNGHY 115
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/80 (50%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKD 702
Y G FHR IKNFMIQ SI+G+ F+DE N KL H G G +SMAN+G
Sbjct: 381 YNGLIFHRSIKNFMIQGGDPTGTGSGG-ESIWGKPFKDELNSKLIHSGRGVVSMANSGPH 439
Query: 703 TNGSQFFITTVKTPWLDGRH 762
TNGSQFFI P L+ +H
Sbjct: 440 TNGSQFFILYKSAPHLNFKH 459
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = +1
Query: 520 EGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 693
+GYKG +FHRVIK+FMIQ SIYG +F+DENF KH G G LSM +
Sbjct: 84 QGYKGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = +2
Query: 374 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQ 499
P PK V FD+ IG G I + LF VPKT ENF Q
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQ 71
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 715 QFFITTVKTPWLDGRHL 765
QFFIT K WLD +H+
Sbjct: 200 QFFITCAKCEWLDNKHV 216
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGW-LSMANAGKD 702
YKGS+FHR+I FMIQ + G+ G G ++MAN+G D
Sbjct: 89 YKGSRFHRIIPGFMIQGGDI----------VRGD------------GKGSVIAMANSGPD 126
Query: 703 TNGSQFFITTVKTPWLDGRHL 765
+NGSQF+ITT+KT WLDG H+
Sbjct: 127 SNGSQFYITTIKTSWLDGEHV 147
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/53 (49%), Positives = 32/53 (60%)
Frame = +2
Query: 383 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKGAS 541
P VT++V D++I +IG IVIGL+G VPKT NF L G G KG S
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKS 86
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAG-K 699
Y G+ FHRVIK+F++Q SIYG F DE + +L+ G ++ ANAG
Sbjct: 49 YDGTLFHRVIKSFLVQ-GGDPTGSGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTP 107
Query: 700 DTNGSQFFITTVKTPWLDGRH 762
+NGSQFFI+ + WLD ++
Sbjct: 108 HSNGSQFFISLDRCDWLDKKN 128
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 44.8 bits (101), Expect = 8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXX---RSIYGE--RFEDENFK--LKHYGAGWLSM 684
Y G FH+V K+F+ Q + +YG+ RF D+ + L+H G ++M
Sbjct: 37 YNGCLFHKVEKDFLAQTGDPTGTGAGGDSVYKFLYGDQARFFDDEIRPDLRHSKKGTIAM 96
Query: 685 ANAGKDTNGSQFFIT-TVKTPWLDGRH 762
A+AG++ N SQF+IT +LD +H
Sbjct: 97 ASAGENCNASQFYITLRDDVDYLDDKH 123
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/52 (46%), Positives = 26/52 (50%)
Frame = +2
Query: 371 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRG 526
+PK K H V FD+ IG I LF VPKTTENF L RG G
Sbjct: 1 MPKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLG 51
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +1
Query: 631 FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVK-TPWLDGRH 762
F+DE + +L+H G ++MA+AG++ N SQF+IT +LD +H
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKH 153
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 434 IGTIVIGLFGKTVPKTTENFFQLAQNLRGRGT 529
+G ++ GL+G+ +P TT NF + RGT
Sbjct: 127 LGRVIFGLYGRLLPLTTANFKAACTSAAYRGT 158
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 437 GTIVIGLFGKTVPKTTENF 493
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,849,272
Number of Sequences: 37544
Number of extensions: 354369
Number of successful extensions: 630
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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