Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30161
(776 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 117 8e-27
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 116 2e-26
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 115 4e-26
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 111 5e-25
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 109 2e-24
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 109 2e-24
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 107 8e-24
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 106 1e-23
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 101 4e-22
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 101 5e-22
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 99 3e-21
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 99 4e-21
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 96 2e-20
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 95 6e-20
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 95 6e-20
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 84 9e-17
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 82 5e-16
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 72 5e-13
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 66 2e-11
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 55 6e-08
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 55 6e-08
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 43 2e-04
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 37 0.013
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 36 0.030
At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl methyl... 28 6.0
At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5) i... 28 6.0
At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5) i... 28 6.0
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 117 bits (282), Expect = 8e-27
Identities = 53/80 (66%), Positives = 60/80 (75%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKGS FHR+I +FM+Q SIYGE+F DENFKLKH G G+LSMANAG+DT
Sbjct: 86 YKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDT 145
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFITTV T WLDGRH+
Sbjct: 146 NGSQFFITTVTTSWLDGRHV 165
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = +2
Query: 290 TKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 469
+ + L++ +L + LG L I + KS E K ++THKV FD++I G IV+GLFGKT
Sbjct: 3 SSVTLLLWSLLL-LGTLSAIQAKKSKENLK--EITHKVYFDVEIDGKAAGRIVMGLFGKT 59
Query: 470 VPKTTENFFQLAQNLRGRGTKG 535
VPKT ENF L +G G G
Sbjct: 60 VPKTVENFRALCTGEKGIGKNG 81
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 116 bits (279), Expect = 2e-26
Identities = 53/80 (66%), Positives = 60/80 (75%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKGSKFHR+I +FMIQ SIYG++F DENFKLKH G G LSMAN+G+DT
Sbjct: 83 YKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDT 142
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFITTV T WLDGRH+
Sbjct: 143 NGSQFFITTVTTSWLDGRHV 162
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +2
Query: 347 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRG 526
IAS ++ E K +VTHKV FD++I + G +VIGLFGK VPKT ENF L +G G
Sbjct: 18 IASIQAKEDLK--EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVG 75
Query: 527 TKG 535
G
Sbjct: 76 KSG 78
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 115 bits (276), Expect = 4e-26
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 514 EGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANA 693
+G GYKGS FHRVI++FMIQ +S+YG F+DENFKL H G G LSMANA
Sbjct: 133 KGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANA 192
Query: 694 GKDTNGSQFFITTVKTPWLDGRHL 765
G +TNGSQFFI T+KT WLDGRH+
Sbjct: 193 GPNTNGSQFFICTIKTSWLDGRHV 216
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +2
Query: 386 KVTHKVSFDMKIGDDN---IGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKGAS 541
K+THKV FD+ +G+ G IVIGL+G VP+T ENF L +G G KG++
Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGST 141
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 111 bits (267), Expect = 5e-25
Identities = 52/81 (64%), Positives = 58/81 (71%)
Frame = +1
Query: 523 GYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKD 702
GYKGS FHR+IK+FMIQ SIYG +FEDENF LKH G G LSMANAG +
Sbjct: 138 GYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPN 197
Query: 703 TNGSQFFITTVKTPWLDGRHL 765
TNGSQFFI TVKT WLD +H+
Sbjct: 198 TNGSQFFICTVKTSWLDNKHV 218
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +2
Query: 347 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRG 526
+A+ + + I KVT+KV FD++IG + G IV+GLFG+ VPKT ENF L + G
Sbjct: 79 MAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG 138
Query: 527 TKGAS 541
KG+S
Sbjct: 139 YKGSS 143
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 109 bits (263), Expect = 2e-24
Identities = 51/80 (63%), Positives = 57/80 (71%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
+KGSKFHRVI NFM Q SIYG +FEDENF+ KH G G LSMANAG +T
Sbjct: 55 FKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANT 114
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFI TVKT WLDG+H+
Sbjct: 115 NGSQFFICTVKTDWLDGKHV 134
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +2
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKG 535
KV FDM I G IV+ L+ P+T ENF L +G G G
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTG 50
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 109 bits (262), Expect = 2e-24
Identities = 49/80 (61%), Positives = 57/80 (71%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
+KGS FHR+I FMIQ SIYG++F DENFKLKH G G+LSMAN+G D+
Sbjct: 110 FKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDS 169
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFITTV T WLDG H+
Sbjct: 170 NGSQFFITTVTTSWLDGHHV 189
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 347 IASAKSDEIPKGPK-VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGR 523
I AK +++ + + VTHKV FD++I G I+IGLFG VPKT ENF L +G
Sbjct: 42 ILDAKLNQVGEDLEGVTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGV 101
Query: 524 GTKG 535
G G
Sbjct: 102 GNMG 105
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 107 bits (257), Expect = 8e-24
Identities = 50/80 (62%), Positives = 56/80 (70%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
+KGS FHRVI NFM Q SIYG +FEDENF+ KH G G LSMANAG +T
Sbjct: 56 FKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANT 115
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFI TVKT WLDG+H+
Sbjct: 116 NGSQFFICTVKTDWLDGKHV 135
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +2
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKG 535
KV FDM IG G IV+ L+ PKT ENF L +G G G
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSG 51
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 106 bits (255), Expect = 1e-23
Identities = 49/80 (61%), Positives = 55/80 (68%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKGS FHR+I FM Q SIYG +FEDENFKLKH G G LSMAN+G +T
Sbjct: 55 YKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNT 114
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFI T KT WLDG+H+
Sbjct: 115 NGSQFFICTEKTSWLDGKHV 134
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +2
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKG 535
KV FD+ IG G +V+ LF P+T NF L G G G
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAG 50
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 101 bits (243), Expect = 4e-22
Identities = 47/80 (58%), Positives = 57/80 (71%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKG++FHRVIK FMIQ SIYG +F+DENF+LKH G LSMAN+G +T
Sbjct: 56 YKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNT 115
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFITT +T LDG+H+
Sbjct: 116 NGSQFFITTTRTSHLDGKHV 135
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +2
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRG 526
K D+ IG + G IVI L+ VPKT ENF L +G G
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLG 47
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 101 bits (242), Expect = 5e-22
Identities = 48/80 (60%), Positives = 53/80 (66%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKGS FHRVI FM Q SIYG +F+DENF KH G G LSMANAG +T
Sbjct: 56 YKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANT 115
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFI T KT WLDG+H+
Sbjct: 116 NGSQFFICTEKTSWLDGKHV 135
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +2
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKG 535
KV FDM +G + G IV+ L+ T P+T ENF L RG G +G
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQG 51
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/81 (55%), Positives = 53/81 (65%)
Frame = +1
Query: 523 GYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKD 702
GYK +FHRVIK+FM+Q SIYG +FEDENF KH G G LSMAN+G +
Sbjct: 80 GYKECQFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPN 139
Query: 703 TNGSQFFITTVKTPWLDGRHL 765
TNG QFFIT K WLD +H+
Sbjct: 140 TNGCQFFITCAKCDWLDNKHV 160
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +2
Query: 374 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQ 499
P PK V FD+ IG G I + LF PKT ENF Q
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQ 66
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 98.7 bits (235), Expect = 4e-21
Identities = 47/80 (58%), Positives = 54/80 (67%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
+KGS FHRVI FM Q SIYG +F+DENF KH GAG LSMAN+G +T
Sbjct: 55 FKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNT 114
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFI T KT WLDG+H+
Sbjct: 115 NGSQFFICTDKTSWLDGKHV 134
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +2
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKG 535
+V FDM + IG I + LF T P T ENF L +G G G
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLG 50
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/80 (53%), Positives = 53/80 (66%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKG+ FHR+I F+IQ SIYG F DENFK++H AG ++MAN G D+
Sbjct: 98 YKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDS 157
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFITTVK WL+G H+
Sbjct: 158 NGSQFFITTVKASWLEGEHV 177
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 293 KLVLIMGTLTMALGILLFIASAKSD-EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 469
+ +L++ LT+ L LF + ++ + ++T++V D+ I +G IVIGL+G
Sbjct: 12 RCLLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDIDGQRLGRIVIGLYGTV 71
Query: 470 VPKTTENFFQLAQNLRGRGTKG 535
VPKT ENF L +G+ + G
Sbjct: 72 VPKTVENFRALCTGEKGKTSSG 93
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 94.7 bits (225), Expect = 6e-20
Identities = 45/80 (56%), Positives = 52/80 (65%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
+KGS FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +T
Sbjct: 59 FKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNT 118
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFI + P LDG+H+
Sbjct: 119 NGSQFFILFKRQPHLDGKHV 138
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 386 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRG 526
K V D+ IG D + IVI LF VPKT ENF L G G
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVG 50
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 94.7 bits (225), Expect = 6e-20
Identities = 45/80 (56%), Positives = 52/80 (65%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
+KGS FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +T
Sbjct: 59 FKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNT 118
Query: 706 NGSQFFITTVKTPWLDGRHL 765
NGSQFFI + P LDG+H+
Sbjct: 119 NGSQFFILFKRQPHLDGKHV 138
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 386 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRG 526
K V D+ IG D + IVI LF VPKT ENF L G G
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVG 50
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 84.2 bits (199), Expect = 9e-17
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKD 702
Y FHR++K+F++Q SIYG +FEDE N +LKH GAG LSMANAG +
Sbjct: 46 YDNVLFHRIVKDFIVQGGDPTGTGRGG-ESIYGSKFEDEINKELKHTGAGILSMANAGPN 104
Query: 703 TNGSQFFITTVKTPWLDGRH 762
TNGSQFFIT P LDG+H
Sbjct: 105 TNGSQFFITLAPQPSLDGKH 124
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 81.8 bits (193), Expect = 5e-16
Identities = 44/80 (55%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFK-LKHYGAGWLSMANAGKD 702
Y FHRVI+ FMIQ +SI+G FEDE K L+H LSMANAG +
Sbjct: 512 YDNHLFHRVIRGFMIQTGDPLGDGTGG-QSIWGREFEDEFHKSLRHDRPFTLSMANAGPN 570
Query: 703 TNGSQFFITTVKTPWLDGRH 762
TNGSQFFITTV TPWLD +H
Sbjct: 571 TNGSQFFITTVATPWLDNKH 590
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKD 702
Y G+ FHR IK FMIQ SI+G++F DE LKH G LSMAN+G +
Sbjct: 37 YDGTIFHRNIKGFMIQGGDPKGTGKGGT-SIWGKKFNDEIRDSLKHNARGMLSMANSGPN 95
Query: 703 TNGSQFFITTVKTPWLDG 756
TNGSQFFIT K P L+G
Sbjct: 96 TNGSQFFITYAKQPHLNG 113
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKD 702
Y G FHR I+NFMIQ SI+G+ F+DE N KL H G G +SMAN+G
Sbjct: 380 YNGVAFHRSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPH 438
Query: 703 TNGSQFFITTVKTPWLDGRH 762
TNGSQFF+ L+ +H
Sbjct: 439 TNGSQFFVLYKSATHLNYKH 458
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 54.8 bits (126), Expect = 6e-08
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +1
Query: 520 EGY-KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANA 693
EGY + FHRVI F++Q SIYG F DE + +L+ G ++MANA
Sbjct: 46 EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD-SIYGGVFADEFHSRLRFSHRGIVAMANA 104
Query: 694 GK-DTNGSQFFITTVKTPWLDGRH 762
++NGSQFF T K WLD +H
Sbjct: 105 SSPNSNGSQFFFTLDKCDWLDKKH 128
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/76 (40%), Positives = 38/76 (50%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 705
YKGS FHR++K Q SIY +F DE+ KL+H G LSM+ A +D
Sbjct: 59 YKGSFFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDK 118
Query: 706 NGSQFFITTVKTPWLD 753
GS F IT LD
Sbjct: 119 FGSHFHITFRPNQQLD 134
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 386 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTK 532
K +V D+ I D T+V LF + PKT+ENF L +G G +
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPR 52
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +1
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXX---RSIYGER---FEDE-NFKLKHYGAGWLSM 684
Y G FH V K+F Q + +YGE+ ++DE + LKH G ++M
Sbjct: 37 YNGCLFHTVQKDFTAQTGDPTGTGAGGDSIYKFLYGEQARFYKDEIHLDLKHSKTGTVAM 96
Query: 685 ANAGKDTNGSQFFIT-TVKTPWLDGRH 762
A+ G++ N SQF+ T +LDG+H
Sbjct: 97 ASGGENLNASQFYFTLRDDLDYLDGKH 123
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +2
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRGRGTKG 535
KV FD+ + G IVI LF P+T ENF L RG G G
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCG 50
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 35.9 bits (79), Expect = 0.030
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Frame = +2
Query: 251 NIETNFVKIARK---RTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTH-------- 397
++E N K++R+ ++ L+L++ T T L LL + A++D I P +T+
Sbjct: 36 SLERN-CKLSRRNLSKSSLLLLLTTQT-TLTPLLDFSKAQADTIAN-PNLTNCENRIPTK 92
Query: 398 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQNLRG 520
K D+ I + IG I+IGL+G VP T F + G
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAG 133
>At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 354
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +1
Query: 613 SIYGERFEDENFKLKH--YGAGWLSMANAGKDTNGSQFFITTVKTP 744
S Y F ++ H Y WLS G + N S +ITT P
Sbjct: 123 SFYSRLFPRKSLHFVHSSYSLHWLSKVPKGLEKNSSSVYITTSSPP 168
>At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 680
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +2
Query: 305 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 484
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 485 ENFFQLAQNLRGRGTKG 535
+F + N GRG G
Sbjct: 349 NDFAE--SNKIGRGGFG 363
>At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 674
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +2
Query: 305 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 484
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 485 ENFFQLAQNLRGRGTKG 535
+F + N GRG G
Sbjct: 349 NDFAE--SNKIGRGGFG 363
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,781,113
Number of Sequences: 28952
Number of extensions: 310716
Number of successful extensions: 640
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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