Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30160
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   3.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   4.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.5  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    23   8.5  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    23   8.5  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 468 HHVRAL**QVEGTGIEALRRAKFKFPGR 551
           HH++    + EG  I +LRR + K P R
Sbjct: 698 HHLQLAPEKTEGVMISSLRRGQLKVPFR 725


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 280 CNKYLVKNCGKDQFHIRMRLH 342
           CN +  K CGK   HIR   H
Sbjct: 497 CNLHRCKLCGKVVTHIRNHYH 517


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 237 YSSDTKCTHSGKSSTF 190
           Y+S TK TH+ KS T+
Sbjct: 474 YNSKTKSTHTPKSITY 489


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = +1

Query: 460  GQPIMSVRSSDRWKAQASRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASP 639
            G P+    + DR +A    LC   SSS  D + S+ + +   Q++  +   S    + S 
Sbjct: 874  GMPLNLNLNLDRSEAGGRSLCTNGSSSGRDSQPSSARSTPKKQNLKFIDEAS--TPSTSA 931

Query: 640  MTACIV 657
            M A IV
Sbjct: 932  MAATIV 937


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -2

Query: 566 YVDLLTSGELELGT 525
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -2

Query: 566 YVDLLTSGELELGT 525
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,691
Number of Sequences: 2352
Number of extensions: 15391
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)