BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30160 (660 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 134 7e-32 AF077530-4|AAC26267.1| 147|Caenorhabditis elegans Hypothetical ... 29 2.9 Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 29 3.9 Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 5.1 U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 8.9 U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 8.9 AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 8.9 >Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical protein F10B5.1 protein. Length = 214 Score = 134 bits (323), Expect = 7e-32 Identities = 60/76 (78%), Positives = 66/76 (86%) Frame = +1 Query: 256 ALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQ 435 ALEA RIC NKY+VKNCGKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+GKPQ Sbjct: 64 ALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQ 123 Query: 436 GTVARVRIGQPIMSVR 483 G VARV IG + S+R Sbjct: 124 GLVARVDIGDILFSMR 139 Score = 119 bits (287), Expect = 2e-27 Identities = 52/62 (83%), Positives = 55/62 (88%) Frame = +2 Query: 68 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 247 MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRANVD FP CVH++S+E E L Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60 Query: 248 SS 253 SS Sbjct: 61 SS 62 Score = 73.3 bits (172), Expect = 1e-13 Identities = 31/47 (65%), Positives = 40/47 (85%) Frame = +3 Query: 510 IEALRRAKFKFPGRQKIYVSKKWGFTKYERYEFEKLREEGRLANDGL 650 IEA RRAKFKFPGRQ I S+KWGFTK++R ++E++R EGRL +DG+ Sbjct: 149 IEAFRRAKFKFPGRQIIVSSRKWGFTKWDREDYERMRAEGRLRSDGV 195 >AF077530-4|AAC26267.1| 147|Caenorhabditis elegans Hypothetical protein C40D2.4 protein. Length = 147 Score = 29.1 bits (62), Expect = 2.9 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = -1 Query: 570 LIRRSFDVRGT*TWHGAEPRCLCLPPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPI 391 +I+R F++R T EP + LP + +N N C TL + TH ++ I Sbjct: 43 IIQRWFEIRRAPTQESWEPEVI-LPEAIAIFEKEFTTNPNPCSHTLEELRMKTHVQVDSI 101 Query: 390 S 388 + Sbjct: 102 N 102 >Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical protein F07A11.6d protein. Length = 567 Score = 28.7 bits (61), Expect = 3.9 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -1 Query: 501 LPPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPISSSA 379 +P VT A + LSN T ST LA T +L P+S A Sbjct: 46 VPVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86 >Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical protein C09G5.2 protein. Length = 476 Score = 28.3 bits (60), Expect = 5.1 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -2 Query: 431 GLPNAPRIPVWSLSAPA 381 G PN+P +P+W LS P+ Sbjct: 232 GFPNSPLLPIWLLSYPS 248 >U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect protein 1, isoformb protein. Length = 1437 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = -3 Query: 190 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 89 RS + IE +D+ + TP +P+ +F+F VPVA Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628 >U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect protein 1, isoforma protein. Length = 1435 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = -3 Query: 190 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 89 RS + IE +D+ + TP +P+ +F+F VPVA Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628 >AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. Length = 1018 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = -3 Query: 190 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 89 RS + IE +D+ + TP +P+ +F+F VPVA Sbjct: 176 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 211 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,835,255 Number of Sequences: 27780 Number of extensions: 359365 Number of successful extensions: 1038 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 991 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1038 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1476380920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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