Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30159
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   147   2e-37
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.6  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   3.4  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   6.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.9  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  147 bits (357), Expect = 2e-37
 Identities = 70/89 (78%), Positives = 77/89 (86%)
 Frame = +1

Query: 241 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 420
           K+   KHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VYDAILEDLVFPAE+VGKRI
Sbjct: 83  KKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAILEDLVFPAEVVGKRI 142

Query: 421 RVKLDGSQLIKVHLDKNQQTTIEHKVDTF 507
           RVKLDGSQLIKVHLDKNQQTTIEHKVDTF
Sbjct: 143 RVKLDGSQLIKVHLDKNQQTTIEHKVDTF 171



 Score =  125 bits (302), Expect = 1e-30
 Identities = 58/82 (70%), Positives = 71/82 (86%)
 Frame = +2

Query: 8   TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 187
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 188 PKLKAFQKIQIRLVRELEKKFS 253
           PK KAFQK+Q RLVRELEKKFS
Sbjct: 65  PKQKAFQKVQTRLVRELEKKFS 86



 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 510 SVYKKLTGREVTFEFPEPYL 569
           SVYKKLTGR+VTFEFPE YL
Sbjct: 173 SVYKKLTGRDVTFEFPENYL 192


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +1

Query: 352 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 483
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 75


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +1

Query: 352 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 483
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 75


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 434 SNLTLMRLPTISAGKTKSSRIASYTEVNVLERGLFCLLATRVLWLGLGRIL 282
           +N  L+ +P  +   T SSR       +     L CLLAT V+W   G++L
Sbjct: 54  ANSRLVTVPAPAKELTDSSRSGGLPSSSS-SSSLSCLLATIVMWC-TGQVL 102


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 250 ELLFELTDKPDLDLLKCLQFRHRHIDDDR 164
           ELLFE    P LDLLK +     +I  D+
Sbjct: 96  ELLFEGVKDPLLDLLKTINSTSLNIPFDK 124


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +2

Query: 221 RLVRELEKKFSV 256
           RLVRE+++KFSV
Sbjct: 628 RLVREMKRKFSV 639


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,432
Number of Sequences: 2352
Number of extensions: 12968
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)