Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30158
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   6.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 145 VPVPHDIPQAPGKPEENATAVQPTKQNTTSAVDT 246
           VP P   P    + E    + QPT+ +TT    T
Sbjct: 396 VPTPEPQPTQTTESEPTQASEQPTESSTTQKPQT 429


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/50 (22%), Positives = 20/50 (40%)
 Frame = +1

Query: 85  KFAMCIALPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNTTS 234
           K+ +  A+     G+      PVP  + +   KP        P++  TT+
Sbjct: 371 KYPILKAIHQTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLTTT 420


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 642 SQETKGQNDSTNKAWSIK 589
           SQ T+G+ND+  +A  +K
Sbjct: 49  SQSTEGENDARPRASQVK 66


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 616 FHQQSLVHQSSCLYSW 569
           FH  +L+  S C+ SW
Sbjct: 171 FHNLTLITYSLCVISW 186


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 616 FHQQSLVHQSSCLYSW 569
           FH  +L+  S C+ SW
Sbjct: 171 FHNLTLITYSLCVISW 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,923
Number of Sequences: 336
Number of extensions: 2862
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)