BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30158
(745 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001711-1|AAN71466.1| 182|Drosophila melanogaster RE67695p pro... 36 0.058
AE014296-1719|AAN11954.1| 182|Drosophila melanogaster CG16707-P... 36 0.058
AE014296-1718|AAN11953.1| 182|Drosophila melanogaster CG16707-P... 36 0.058
AE014296-1717|AAN11952.1| 183|Drosophila melanogaster CG16707-P... 36 0.058
AE014296-1716|AAF50218.1| 183|Drosophila melanogaster CG16707-P... 36 0.058
BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p pro... 36 0.077
AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-P... 36 0.077
AE014297-186|AAN13261.1| 654|Drosophila melanogaster CG31537-PA... 29 8.8
>BT001711-1|AAN71466.1| 182|Drosophila melanogaster RE67695p
protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.058
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 589 FDGPSFVXXXXXXXXXXXXXFMGFKYYKNHTERNYHTL 702
FDG SF+ + +K+YK ERNYHTL
Sbjct: 145 FDGSSFIGGIVLTLGLLAIGLVAYKFYKARNERNYHTL 182
>AE014296-1719|AAN11954.1| 182|Drosophila melanogaster CG16707-PB,
isoform B protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.058
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 589 FDGPSFVXXXXXXXXXXXXXFMGFKYYKNHTERNYHTL 702
FDG SF+ + +K+YK ERNYHTL
Sbjct: 145 FDGSSFIGGIVLTLGLLAIGLVAYKFYKARNERNYHTL 182
>AE014296-1718|AAN11953.1| 182|Drosophila melanogaster CG16707-PA,
isoform A protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.058
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 589 FDGPSFVXXXXXXXXXXXXXFMGFKYYKNHTERNYHTL 702
FDG SF+ + +K+YK ERNYHTL
Sbjct: 145 FDGSSFIGGIVLTLGLLAIGLVAYKFYKARNERNYHTL 182
>AE014296-1717|AAN11952.1| 183|Drosophila melanogaster CG16707-PD,
isoform D protein.
Length = 183
Score = 35.9 bits (79), Expect = 0.058
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 589 FDGPSFVXXXXXXXXXXXXXFMGFKYYKNHTERNYHTL 702
FDG SF+ + +K+YK ERNYHTL
Sbjct: 146 FDGSSFIGGIVLTLGLLAIGLVAYKFYKARNERNYHTL 183
>AE014296-1716|AAF50218.1| 183|Drosophila melanogaster CG16707-PC,
isoform C protein.
Length = 183
Score = 35.9 bits (79), Expect = 0.058
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 589 FDGPSFVXXXXXXXXXXXXXFMGFKYYKNHTERNYHTL 702
FDG SF+ + +K+YK ERNYHTL
Sbjct: 146 FDGSSFIGGIVLTLGLLAIGLVAYKFYKARNERNYHTL 183
>BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p protein.
Length = 1654
Score = 35.5 bits (78), Expect = 0.077
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 106 LPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQ 222
+P Q AQL TTVP+P + Q+P P N AVQ +Q
Sbjct: 1497 VPRRQKHAQLATTVPIPPSLAQSPRAP-SNLEAVQLQQQ 1534
>AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-PA
protein.
Length = 1654
Score = 35.5 bits (78), Expect = 0.077
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 106 LPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQ 222
+P Q AQL TTVP+P + Q+P P N AVQ +Q
Sbjct: 1497 VPRRQKHAQLATTVPIPPSLAQSPRAP-SNLEAVQLQQQ 1534
>AE014297-186|AAN13261.1| 654|Drosophila melanogaster CG31537-PA
protein.
Length = 654
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 430 QLKLYQNTRQKLLKKVKQA---RQLKPKKRCDHSEIRTCQIY*SPHTHGTNC 576
+L Y + RQ ++ +QA RQLK K+ H ++RT S H H +C
Sbjct: 476 ELSRYTSYRQSVMCSNRQAHSVRQLKRNKQQKHVQLRTKPSSHSRHHHHHHC 527
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,970,307
Number of Sequences: 53049
Number of extensions: 502484
Number of successful extensions: 1686
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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