Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30157
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   1.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.2  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +3

Query: 555 NGRVTESWHLRPRASAKTIKTIPRCAFASFFCAWRSCVRFLLKHVW 692
           N R   S  L PRA  KTIK I     + F   W   + F L  V+
Sbjct: 232 NSRRASSRGLIPRAKVKTIK-ITFVIVSVFILCWSPYIIFDLLQVF 276


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +3

Query: 318 SILLTSNVYLWLVLAADVRVHACVCSRDSKF*KVLEH*GLGVYFFVTLQ 464
           S L+    ++WLVL++ VR +A   SR   F K++ + G G Y  VT Q
Sbjct: 488 SFLVNDFGFIWLVLSSTVRAYA---SR--AFKKIVTYKG-GKYRKVTFQ 530


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 665 TRTPRTKKRGKGAARDRFYS 606
           +RTPR K  G+G   +RF S
Sbjct: 212 SRTPRPKHDGRGRIVERFTS 231



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 65  MGSKAPSCPPQPQ 27
           +GS A +CPP P+
Sbjct: 89  LGSYAANCPPSPK 101



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 103 GSKAPSCPPQPQ 68
           GS A +CPP P+
Sbjct: 90  GSYAANCPPSPK 101


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 83  PTSTSKMGSKAPSCPPQPQKW 21
           P++ S  GSK     P+P +W
Sbjct: 416 PSTPSADGSKPVQTTPKPGQW 436


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,149
Number of Sequences: 336
Number of extensions: 3697
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)