Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30157
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0261 + 23663639-23664805                                         30   2.0  
07_03_0806 + 21654057-21655154,21655728-21655796,21656110-216562...    29   2.6  
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639...    29   2.6  
04_04_0578 + 26353830-26353929,26354030-26354277,26354539-26354931     29   4.6  
07_03_0936 - 22745534-22745674,22745765-22745828,22745921-227459...    28   8.1  
01_07_0291 + 42555233-42555444,42556515-42556550,42556652-425567...    28   8.1  

>05_05_0261 + 23663639-23664805
          Length = 388

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +3

Query: 552 RNGRVTESWHL----RPRASAKTIKTIPRCAFASFFCAWRSC 665
           R GRV  SWHL    R R+   +I  +PR    SF CA   C
Sbjct: 24  RMGRVCHSWHLAVAERQRSKLPSI-LVPRADGPSFACALAGC 64


>07_03_0806 +
           21654057-21655154,21655728-21655796,21656110-21656274,
           21656416-21656589,21659506-21659769,21659957-21660070
          Length = 627

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = -1

Query: 372 LHLQRGRAKDKHLK*EEWISHNCPKLRNLR--HLHDSFTELAV*ETSKTVARCCRQYSPI 199
           LHL      D+     E +SH CP L+ L    +H    EL +  T+  +  C    + +
Sbjct: 201 LHLSNTFVADEGELLSEVVSHGCPCLKTLELIDIHAGARELTI-HTTSLLTLCVVSINDL 259

Query: 198 QILNI 184
           Q+L++
Sbjct: 260 QLLDV 264


>05_02_0078 -
           6386278-6386291,6386462-6386594,6386721-6388613,
           6391153-6391239,6391691-6391765,6393982-6394327,
           6394428-6394450
          Length = 856

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 82  PPQPQKWEVKHRRAHLNLKNGK 17
           PP PQ ++V  R+ H+N++N K
Sbjct: 185 PPSPQTFQVHERQKHINIENMK 206


>04_04_0578 + 26353830-26353929,26354030-26354277,26354539-26354931
          Length = 246

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 673 NRTHERHAQKKEAKAQRGIVFIVLALALGRR 581
           +R HERHA   E     G+V+ V A A+ RR
Sbjct: 125 HRIHERHALLLEVVMTFGLVYTVYATAVDRR 155


>07_03_0936 -
           22745534-22745674,22745765-22745828,22745921-22745952,
           22746033-22746115,22746328-22746574
          Length = 188

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 644 KRGKGAARDRFYSFSAGSRSEMPGFGNTAVPDGE 543
           +R   A  D  Y+ +   +  MPGFG    P G+
Sbjct: 120 ERNGVATEDELYNITYYGKGRMPGFGEKCTPRGQ 153


>01_07_0291 +
           42555233-42555444,42556515-42556550,42556652-42556796,
           42556885-42556938,42557130-42557260,42557830-42558056,
           42558670-42558846,42558928-42559076
          Length = 376

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -1

Query: 426 ALKLSKI*NPYYRRKRALLHLQRGR 352
           A ++S++  PY RR RA+ HL++GR
Sbjct: 220 AFRMSEVAEPYIRR-RAVRHLEKGR 243


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,532,561
Number of Sequences: 37544
Number of extensions: 412090
Number of successful extensions: 1093
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)