Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30157
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015960-1|AAV36845.1|  110|Drosophila melanogaster RH46982p pro...    32   0.85 
AE014296-2592|AAN11770.1|  110|Drosophila melanogaster CG32151-P...    32   0.85 
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro...    29   7.9  
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio...    29   7.9  
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.    29   7.9  
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA...    29   7.9  
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD...    29   7.9  
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB...    29   7.9  
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC...    29   7.9  

>BT015960-1|AAV36845.1|  110|Drosophila melanogaster RH46982p
           protein.
          Length = 110

 Score = 31.9 bits (69), Expect = 0.85
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 48  RCFTSHF*G*GGHDGALLPVYFLSSMVRCGFGRILRPYCLA 170
           RCF+SH+   GG   A + +  L++ + C   R  R +CLA
Sbjct: 6   RCFSSHYCEGGGQTNAFVSMSVLNTALECREFRRKRHFCLA 46


>AE014296-2592|AAN11770.1|  110|Drosophila melanogaster CG32151-PA
           protein.
          Length = 110

 Score = 31.9 bits (69), Expect = 0.85
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 48  RCFTSHF*G*GGHDGALLPVYFLSSMVRCGFGRILRPYCLA 170
           RCF+SH+   GG   A + +  L++ + C   R  R +CLA
Sbjct: 6   RCFSSHYCEGGGQTNAFVSMSVLNTALECREFRRKRHFCLA 46


>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
           protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 106 TGSKAPSCPPQPQKWEVKHRRAHL 35
           + S+ PS PPQPQ+++  H   H+
Sbjct: 127 SNSQPPSMPPQPQQFQSPHPSPHM 150


>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
            corepressor Atro protein.
          Length = 1985

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 106  TGSKAPSCPPQPQKWEVKHRRAHL 35
            + S+ PS PPQPQ+++  H   H+
Sbjct: 959  SNSQPPSMPPQPQQFQSPHPSPHM 982


>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
          Length = 1966

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 106  TGSKAPSCPPQPQKWEVKHRRAHL 35
            + S+ PS PPQPQ+++  H   H+
Sbjct: 959  SNSQPPSMPPQPQQFQSPHPSPHM 982


>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
            isoform A protein.
          Length = 1966

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 106  TGSKAPSCPPQPQKWEVKHRRAHL 35
            + S+ PS PPQPQ+++  H   H+
Sbjct: 959  SNSQPPSMPPQPQQFQSPHPSPHM 982


>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
            isoform D protein.
          Length = 1985

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 106  TGSKAPSCPPQPQKWEVKHRRAHL 35
            + S+ PS PPQPQ+++  H   H+
Sbjct: 959  SNSQPPSMPPQPQQFQSPHPSPHM 982


>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
            isoform B protein.
          Length = 1985

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 106  TGSKAPSCPPQPQKWEVKHRRAHL 35
            + S+ PS PPQPQ+++  H   H+
Sbjct: 959  SNSQPPSMPPQPQQFQSPHPSPHM 982


>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
            isoform C protein.
          Length = 1988

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 106  TGSKAPSCPPQPQKWEVKHRRAHL 35
            + S+ PS PPQPQ+++  H   H+
Sbjct: 959  SNSQPPSMPPQPQQFQSPHPSPHM 982


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,351,141
Number of Sequences: 53049
Number of extensions: 696629
Number of successful extensions: 1720
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)