Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30156
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.1  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   9.4  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 560 HMLTYNXXXXXXXXXRASIDEDIIYFKRYKKELQN 456
           H L++N          A  D D IYF++YK +  +
Sbjct: 86  HFLSHNKQQMWKELT-AKYDPDGIYFEKYKDKFDS 119


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/14 (64%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = -2

Query: 369 LC-EMVNEGETIIG 331
           LC E+ NEG+TI+G
Sbjct: 278 LCDEICNEGQTILG 291


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/14 (64%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = -2

Query: 369 LC-EMVNEGETIIG 331
           LC E+ NEG+TI+G
Sbjct: 278 LCDEICNEGQTILG 291


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 509 SIDEDIIYFKRYKKELQNSGHLH 441
           S+ EDI+ +  +K +  +  HLH
Sbjct: 67  SLGEDIVTYSGHKLKAGSMVHLH 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,271
Number of Sequences: 336
Number of extensions: 2291
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)