BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30156 (685 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value EF531618-1|ABQ43327.1| 1094|Homo sapiens solute carrier family 4... 30 6.7 BC030977-1|AAH30977.1| 646|Homo sapiens SLC4A4 protein protein. 30 6.7 AF310248-1|AAG47773.1| 1079|Homo sapiens sodium bicarbonate cotr... 30 6.7 AF157492-1|AAF80343.1| 995|Homo sapiens sodium bicarbonate cotr... 30 6.7 AF069510-1|AAD42020.1| 1079|Homo sapiens sodium bicarbonate cotr... 30 6.7 AF053754-1|AAF21719.1| 1079|Homo sapiens electrogenic Na+ bicarb... 30 6.7 AF053753-1|AAF21718.1| 1079|Homo sapiens electrogenic Na+ bicarb... 30 6.7 AF011390-1|AAC39840.1| 1079|Homo sapiens pancreas sodium bicarbo... 30 6.7 AF007216-1|AAC51645.1| 1035|Homo sapiens sodium bicarbonate cotr... 30 6.7 AF004813-1|AAD31379.1| 670|Homo sapiens electrogenic Na+ bicarb... 30 6.7 >EF531618-1|ABQ43327.1| 1094|Homo sapiens solute carrier family 4 sodium bicarbonate cotransporter member 4 variant C protein. Length = 1094 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 540 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 567 >BC030977-1|AAH30977.1| 646|Homo sapiens SLC4A4 protein protein. Length = 646 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 496 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 523 >AF310248-1|AAG47773.1| 1079|Homo sapiens sodium bicarbonate cotransporter protein. Length = 1079 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 540 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 567 >AF157492-1|AAF80343.1| 995|Homo sapiens sodium bicarbonate cotransporter NBC1 protein. Length = 995 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 540 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 567 >AF069510-1|AAD42020.1| 1079|Homo sapiens sodium bicarbonate cotransporter protein. Length = 1079 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 540 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 567 >AF053754-1|AAF21719.1| 1079|Homo sapiens electrogenic Na+ bicarbonate cotransporter form 2 protein. Length = 1079 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 540 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 567 >AF053753-1|AAF21718.1| 1079|Homo sapiens electrogenic Na+ bicarbonate cotransporter protein. Length = 1079 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 540 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 567 >AF011390-1|AAC39840.1| 1079|Homo sapiens pancreas sodium bicarbonate cotransporter protein. Length = 1079 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 540 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 567 >AF007216-1|AAC51645.1| 1035|Homo sapiens sodium bicarbonate cotransporter protein. Length = 1035 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 496 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 523 >AF004813-1|AAD31379.1| 670|Homo sapiens electrogenic Na+ bicarbonate cotransporter protein. Length = 670 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +2 Query: 131 FNFAKDSS*LYLNVRLIIG*FSMFSCKI 214 FNF+KD++ YL RL IG +S F C I Sbjct: 520 FNFSKDNNFDYLEFRLWIGLWSAFLCLI 547 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 65,832,973 Number of Sequences: 237096 Number of extensions: 1058263 Number of successful extensions: 1148 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1148 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7783251346 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -