Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30156
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical
           protein F53H4.1 protein.
          Length = 957

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -3

Query: 500 EDIIYFKRYKKELQNSGHLHNRKFQRSMPNNEI 402
           ED+ +FK+ +KE   +  LHN +  + +PNN +
Sbjct: 652 EDLKFFKQVQKENLAARLLHNAEIDQFVPNNTL 684


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 41  DRYTN--VVPIKNY*RMTSFIDVSQKH*SNNRFNFAKDS 151
           D+Y N  +  I N  R T FI + QK+  N+RF F K++
Sbjct: 35  DQYKNLFIFTIANM-RSTRFIAIRQKYKENSRFFFGKNN 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,501,669
Number of Sequences: 27780
Number of extensions: 201678
Number of successful extensions: 423
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)