Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30153
(781 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q96CW1 Cluster: AP-2 complex subunit mu-1; n=94; Fungi/... 182 1e-44
UniRef50_P35603 Cluster: AP-2 complex subunit mu; n=23; Eukaryot... 172 7e-42
UniRef50_Q6CC50 Cluster: Yarrowia lipolytica chromosome C of str... 79 1e-13
UniRef50_Q00U04 Cluster: Clathrin adaptor complexes medium subun... 74 5e-12
UniRef50_Q6CUL9 Cluster: Similar to sp|Q99186 Saccharomyces cere... 74 5e-12
UniRef50_Q3E8F7 Cluster: Uncharacterized protein At5g46630.2; n=... 64 5e-09
UniRef50_Q5A2L1 Cluster: Potential clathrin-associated protein A... 62 2e-08
UniRef50_Q22V00 Cluster: Adaptor complexes medium subunit family... 61 3e-08
UniRef50_Q4QBN3 Cluster: Adaptor complex AP-1 medium subunit, pu... 58 2e-07
UniRef50_Q4DZV1 Cluster: Clathrin coat assembly protein, putativ... 58 3e-07
UniRef50_Q22B93 Cluster: Adaptor complexes medium subunit family... 58 3e-07
UniRef50_A3LVW0 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 58 3e-07
UniRef50_Q1EQ16 Cluster: Mu 2 subunit isoform 2; n=1; Entamoeba ... 56 1e-06
UniRef50_A2ER69 Cluster: Adaptor complexes medium subunit family... 55 2e-06
UniRef50_Q99186 Cluster: AP-2 complex subunit mu; n=2; Saccharom... 54 3e-06
UniRef50_Q9BXS5 Cluster: AP-1 complex subunit mu-1; n=137; Eukar... 54 5e-06
UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1; Schizosac... 53 7e-06
UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6; Sacchar... 53 9e-06
UniRef50_A5JZZ1 Cluster: Clathrin coat assembly protein AP50, pu... 52 2e-05
UniRef50_Q6C119 Cluster: Similar to sp|Q00776 Saccharomyces cere... 50 7e-05
UniRef50_Q7RAH7 Cluster: Clathrin coat assembly protein ap50; n=... 49 2e-04
UniRef50_Q00776 Cluster: AP-1 complex subunit mu-1 (Mu(1)-adapti... 49 2e-04
UniRef50_A2FR45 Cluster: Mu adaptin, putative; n=1; Trichomonas ... 48 2e-04
UniRef50_Q4RWQ3 Cluster: Chromosome 15 SCAF14981, whole genome s... 48 3e-04
UniRef50_Q9SGX7 Cluster: F20B24.16; n=4; Magnoliophyta|Rep: F20B... 48 3e-04
UniRef50_Q4Q1B6 Cluster: Clathrin coat assembly protein-like pro... 48 3e-04
UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=... 48 3e-04
UniRef50_A0BJZ5 Cluster: Chromosome undetermined scaffold_111, w... 46 0.001
UniRef50_Q7QZ95 Cluster: GLP_567_48751_50055; n=2; Giardia intes... 45 0.002
UniRef50_Q014Q3 Cluster: Clathrin adaptor complexes medium subun... 43 0.007
UniRef50_Q6CIM6 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 43 0.007
UniRef50_Q9SB50 Cluster: Clathrin coat assembly like protein; n=... 41 0.040
UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6; A... 39 0.12
UniRef50_Q759G1 Cluster: ADR315Wp; n=1; Eremothecium gossypii|Re... 39 0.12
UniRef50_P38700 Cluster: Adaptin medium chain homolog APM2; n=3;... 39 0.12
UniRef50_A7TLM0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_Q5CWB6 Cluster: Clathrin coat assembly protein AP50; n=... 37 0.49
UniRef50_Q1JSZ4 Cluster: Clathrin coat assembly protein, putativ... 37 0.49
UniRef50_Q75DH8 Cluster: ABR047Wp; n=1; Eremothecium gossypii|Re... 36 0.86
UniRef50_A5K4K8 Cluster: Adapter-related protein complex 4 mu 1 ... 36 1.1
UniRef50_P12752 Cluster: Uncharacterized protein in phr 5'region... 35 2.0
UniRef50_A2QH25 Cluster: Catalytic activity: hydrolysis of termi... 34 4.6
UniRef50_Q9LQD4 Cluster: F28C11.2; n=8; core eudicotyledons|Rep:... 33 6.1
UniRef50_A4R295 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_P75168 Cluster: Phosphoenolpyruvate-protein phosphotran... 33 6.1
UniRef50_Q8G817 Cluster: N utilization substance protein B homol... 33 6.1
UniRef50_Q2R137 Cluster: Expressed protein; n=1; Oryza sativa (j... 33 8.0
UniRef50_A7PVY2 Cluster: Chromosome chr8 scaffold_34, whole geno... 33 8.0
UniRef50_Q383N0 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
UniRef50_Q09934 Cluster: Putative uncharacterized protein ptr-13... 33 8.0
>UniRef50_Q96CW1 Cluster: AP-2 complex subunit mu-1; n=94;
Fungi/Metazoa group|Rep: AP-2 complex subunit mu-1 -
Homo sapiens (Human)
Length = 435
Score = 182 bits (442), Expect = 1e-44
Identities = 92/147 (62%), Positives = 100/147 (68%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXX 182
VIPLVREVGRTK+EVKVV+KSNFKPSLL QKIEV+IPTP
Sbjct: 289 VIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASE 348
Query: 183 XRYRMEDQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVPFAPSGFKVRYLKVFE 362
+ + G + L T+ KKKW RPPISM FEVPFAPSG KVRYLKVFE
Sbjct: 349 NAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYLKVFE 408
Query: 363 PKLNYSDHDVIKWVRYIGRSGLYETRC 443
PKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 409 PKLNYSDHDVIKWVRYIGRSGIYETRC 435
Score = 92.3 bits (219), Expect = 1e-17
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = +1
Query: 106 RFQLRMNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELSRPTPRRSGR 285
R +NTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIEL PT +
Sbjct: 323 RIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIEL-LPTNDKKKW 381
Query: 286 ARP 294
ARP
Sbjct: 382 ARP 384
>UniRef50_P35603 Cluster: AP-2 complex subunit mu; n=23;
Eukaryota|Rep: AP-2 complex subunit mu - Caenorhabditis
elegans
Length = 441
Score = 172 bits (419), Expect = 7e-42
Identities = 90/149 (60%), Positives = 97/149 (65%), Gaps = 2/149 (1%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXX 182
VIPLVREV R KMEVKVV+KSNFKPSLL QK+EV+IPTP
Sbjct: 293 VIPLVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGE 352
Query: 183 XRYRMEDQAHGGHEGDPAVCRD*ALETDT--KKKWTRPPISMGFEVPFAPSGFKVRYLKV 356
+ + G + L T KKKW RPP+SM FEVPFAPSG KVRYLKV
Sbjct: 353 NAIVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRYLKV 412
Query: 357 FEPKLNYSDHDVIKWVRYIGRSGLYETRC 443
FEPKLNYSDHDVIKWVRYIGRSGLYETRC
Sbjct: 413 FEPKLNYSDHDVIKWVRYIGRSGLYETRC 441
Score = 86.2 bits (204), Expect = 8e-16
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +1
Query: 124 NTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIEL 255
NTSGVQLIC+KGKAKYKA ENAIVWKIKRMAGMKE+Q+SAEI+L
Sbjct: 333 NTSGVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAEIDL 376
>UniRef50_Q6CC50 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 419
Score = 79.0 bits (186), Expect = 1e-13
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXX 182
V+P V+ VG++++E +V+K+NF + + IPTP + +
Sbjct: 276 VVPSVQIVGKSRVEYDIVIKANFPKQQTATNVVINIPTPRNAAKTTINASNGKAKYDSST 335
Query: 183 XRYRME-DQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVPFAP-SGFKVRYLKV 356
+ + + GG E + T+ K W +PPISM FE+ SG VRYLKV
Sbjct: 336 NQIVWKVSRISGGSEISLRATAELTFTTE-KTPWNKPPISMDFEITMITCSGLVVRYLKV 394
Query: 357 FEPKLNYSDHDVIKWVRYIGRSGLYETR 440
FE K NY + +KWVRY+ + G YE R
Sbjct: 395 FE-KSNY---NTVKWVRYLMKGGSYEIR 418
Score = 41.9 bits (94), Expect = 0.017
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 124 NTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELSRPTPR 273
N + + GKAKY +S N IVWK+ R++G E L A EL+ T +
Sbjct: 316 NAAKTTINASNGKAKYDSSTNQIVWKVSRISGGSEISLRATAELTFTTEK 365
>UniRef50_Q00U04 Cluster: Clathrin adaptor complexes medium subunit
family protein; n=2; Ostreococcus|Rep: Clathrin adaptor
complexes medium subunit family protein - Ostreococcus
tauri
Length = 496
Score = 73.7 bits (173), Expect = 5e-12
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXX 182
++P V+E+GRT++ + V L+S + PS + ++ V+IP P R
Sbjct: 339 LMPAVKELGRTRLAMSVNLRSLYDPSTVANEVRVRIPVPKLTARATIRVSAGKAKYVPEE 398
Query: 183 XRYRMEDQAHGGHEG---DPAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYL 350
R + + GH+ D V A K W +PPI++ F VP F SG ++R+L
Sbjct: 399 GCLRWKIKKLAGHQELQLDAEVML--ANTLSDHKPWVQPPINIEFNVPMFTASGLRIRFL 456
Query: 351 KVFEPKLNYSDHDVIKWVRYIGRSG 425
V E N ++DV +WVRY+ +SG
Sbjct: 457 NVEE--RNMGNYDVTRWVRYLCQSG 479
Score = 41.9 bits (94), Expect = 0.017
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1
Query: 157 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELS 258
GKAKY E + WKIK++AG +E QL AE+ L+
Sbjct: 390 GKAKYVPEEGCLRWKIKKLAGHQELQLDAEVMLA 423
>UniRef50_Q6CUL9 Cluster: Similar to sp|Q99186 Saccharomyces
cerevisiae YOL062c APM4 AP-2 complex subunit; n=3;
Saccharomycetales|Rep: Similar to sp|Q99186
Saccharomyces cerevisiae YOL062c APM4 AP-2 complex
subunit - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 475
Score = 73.7 bits (173), Expect = 5e-12
Identities = 53/155 (34%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQR-------GATDXXXXX 161
VIP V V + + KV L+S F ++ + + VKIP P + G
Sbjct: 327 VIPEVEIVKNSTLNYKVTLRSLFPSNVSAKDVTVKIPVPPTTIKCDFNVSGGKCKYDAGE 386
Query: 162 XXXXXXXXRYR-MEDQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFE-VPFAPSGF 335
+Y+ + G PA D +W+RPPISMGFE V F+ SG
Sbjct: 387 KCMVWKYNKYKGSTENTLSGKVAIPATSHD----LSDLLRWSRPPISMGFEIVMFSNSGL 442
Query: 336 KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
VR+LK EP+LNY +KW++YI SG YE R
Sbjct: 443 VVRHLKCQEPQLNYQP---VKWIKYISHSGAYEIR 474
Score = 33.1 bits (72), Expect = 8.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 157 GKAKYKASENAIVWKIKRMAGMKETQLSAEIEL 255
GK KY A E +VWK + G E LS ++ +
Sbjct: 378 GKCKYDAGEKCMVWKYNKYKGSTENTLSGKVAI 410
>UniRef50_Q3E8F7 Cluster: Uncharacterized protein At5g46630.2; n=17;
Viridiplantae|Rep: Uncharacterized protein At5g46630.2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 441
Score = 63.7 bits (148), Expect = 5e-09
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXX 182
V+P ++E+GRT+MEV V +KS F + + VKIP P + +
Sbjct: 294 VLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTGRAKYNPSI 353
Query: 183 XRYRMEDQAHGGHEGDPAVCRD*ALET-DTKKKWTRPPISMGFEVP-FAPSGFKVRYLKV 356
+ + G + T KK WTRPPI M F+VP F SG +VR+LKV
Sbjct: 354 DCLVWKIRKFPGQTESTLSAEIELISTMGEKKSWTRPPIQMEFQVPMFTASGLRVRFLKV 413
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 157 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELSRPTPRRSGRARP 294
G+AKY S + +VWKI++ G E+ LSAEIEL + RP
Sbjct: 345 GRAKYNPSIDCLVWKIRKFPGQTESTLSAEIELISTMGEKKSWTRP 390
>UniRef50_Q5A2L1 Cluster: Potential clathrin-associated protein AP-2
complex component; n=3; Saccharomycetales|Rep: Potential
clathrin-associated protein AP-2 complex component -
Candida albicans (Yeast)
Length = 470
Score = 62.1 bits (144), Expect = 2e-08
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXX 182
V P V+E+GR+K+ K+ +KS F L + +KIPTP RG T
Sbjct: 325 VYPQVQEIGRSKLMYKIRIKSFFPEKLPATNVSLKIPTP----RGGT--ILSNLSSSIGK 378
Query: 183 XRYRMEDQA--------HGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGF 335
++ ED + G E + +D WTRPPI + F + F+ SG
Sbjct: 379 TKFHPEDNSISWKCNKFFGEQEHVLTAEIEVNSSSDELLYWTRPPIKLDFFLDMFSSSGL 438
Query: 336 KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
V++L+V E K NY +KWV+Y +SG YE R
Sbjct: 439 TVKFLRVQE-KNNYR---TVKWVKYGTQSGSYEIR 469
Score = 33.9 bits (74), Expect = 4.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 157 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELS 258
GK K+ +N+I WK + G +E L+AEIE++
Sbjct: 377 GKTKFHPEDNSISWKCNKFFGEQEHVLTAEIEVN 410
>UniRef50_Q22V00 Cluster: Adaptor complexes medium subunit family
protein; n=5; Oligohymenophorea|Rep: Adaptor complexes
medium subunit family protein - Tetrahymena thermophila
SB210
Length = 433
Score = 60.9 bits (141), Expect = 3e-08
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXX 182
++P++ E G +EV+V LKS F + + +K+P P +
Sbjct: 291 IMPVINEDGNN-IEVRVKLKSIFDKTQYATNVALKVPCPKNTANTSNTASIGRAKYEPEQ 349
Query: 183 XRYRMEDQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVF 359
+ G C T K W +PPIS+ F+VP F SG +VR+L++
Sbjct: 350 GGIVWRIKKFQGETEALLRCEIVLSNTALDKNWVKPPISLEFQVPSFTASGLRVRFLRIH 409
Query: 360 EPKLNYSDHDVIKWVRYIGRSGLY 431
E S + KW+RYI + G Y
Sbjct: 410 EK----SGYHPTKWIRYITKGGEY 429
Score = 37.9 bits (84), Expect = 0.28
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 124 NTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELS 258
NT+ G+AKY+ + IVW+IK+ G E L EI LS
Sbjct: 330 NTANTSNTASIGRAKYEPEQGGIVWRIKKFQGETEALLRCEIVLS 374
>UniRef50_Q4QBN3 Cluster: Adaptor complex AP-1 medium subunit,
putative; n=8; Trypanosomatidae|Rep: Adaptor complex
AP-1 medium subunit, putative - Leishmania major
Length = 433
Score = 58.4 bits (135), Expect = 2e-07
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Frame = +3
Query: 27 GRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQ--RGATDXXXXXXXXXXXXXRYRME 200
G T+++V+ L++ ++ SL ++EV IP P + + + + +
Sbjct: 295 GTTRVKVQCTLQTKYRASLTANEMEVYIPIPSDADCPQSNSQTGHLQYAPQMNALIWNLG 354
Query: 201 DQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNY 377
A H A ++ + K ++ P+ + F +P FA SGF+VRY+KV E K NY
Sbjct: 355 KIAGNRHCSCSAEFHLPSIRSSDMKDLSKMPVKVRFVIPYFAASGFQVRYVKVSE-KSNY 413
Query: 378 SDHDVIKWVRYIGRSGLYETR 440
WVRY+ +SG+YE R
Sbjct: 414 V---ATPWVRYVTQSGVYEIR 431
>UniRef50_Q4DZV1 Cluster: Clathrin coat assembly protein, putative;
n=2; Trypanosoma cruzi|Rep: Clathrin coat assembly
protein, putative - Trypanosoma cruzi
Length = 416
Score = 57.6 bits (133), Expect = 3e-07
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Frame = +3
Query: 15 VREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXXXRYR 194
+REV +T+ E+ LK + K + +E++IP P
Sbjct: 272 IREVSKTRTEIDFGLKCDIKEGMRCDDVEIRIPCPENTADVNLSVARGRVQFDGVQHAVI 331
Query: 195 MEDQAHGGHEGDPAVCRD*ALETDT----KKKWTRPPISMGFEVP-FAPSGFKVRYLKVF 359
+ ++ + + + L T ++ W+RPPI + F P SGF+V+ L+V
Sbjct: 332 WKLPTLSQNDEELLLTAEIVLLAPTIATSEQVWSRPPIKISFTTPSHVLSGFRVKELRVE 391
Query: 360 EPKLNYSDHDVIKWVRYIGRSGLYETR 440
EP L YS KWVRY+ +G YE R
Sbjct: 392 EPLLRYS---ASKWVRYLTTTGQYEWR 415
Score = 34.7 bits (76), Expect = 2.6
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 124 NTSGVQLICLKGKAKYKASENAIVWKIKRMA-GMKETQLSAEIELSRPT 267
NT+ V L +G+ ++ ++A++WK+ ++ +E L+AEI L PT
Sbjct: 308 NTADVNLSVARGRVQFDGVQHAVIWKLPTLSQNDEELLLTAEIVLLAPT 356
>UniRef50_Q22B93 Cluster: Adaptor complexes medium subunit family
protein; n=3; Tetrahymena thermophila|Rep: Adaptor
complexes medium subunit family protein - Tetrahymena
thermophila SB210
Length = 444
Score = 57.6 bits (133), Expect = 3e-07
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Frame = +3
Query: 18 REVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXXXRYRM 197
R+ K+E V +KSNFK +E+ IP P + +
Sbjct: 303 RKPNSNKIEFTVKVKSNFKQKSTANNVEIFIPVPDDAETPVFKAAYGTVEYVAEKEAMGW 362
Query: 198 EDQAHGGHEGD--PAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPK 368
+ + G A + + ++K+ R PIS+ FE+P + SGF+VRYLK+ E
Sbjct: 363 KFKQFPGQREYMMTATFHLPTVVSPNREKFQRMPISINFEIPYYTVSGFQVRYLKIQEK- 421
Query: 369 LNYSDHDVIKWVRYIGRSGLYETR 440
S + + WVRYI ++G Y+ R
Sbjct: 422 ---SGYHALPWVRYITQNGDYQIR 442
>UniRef50_A3LVW0 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 465
Score = 57.6 bits (133), Expect = 3e-07
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Frame = +3
Query: 15 VREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPH-------EHQRGATDXXXXXXXXX 173
V E+GR+K+ K+ +KS F + +++K+PTP + G +
Sbjct: 312 VYEIGRSKLSYKIRVKSCFPAKIPATNVQIKVPTPKGVLDSYSSNSAGKSKFHPEDNVIL 371
Query: 174 XXXXRYRMEDQ---------AHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVP-FA 323
++ E + A H+ + + T++ W+RPPI + F + F+
Sbjct: 372 WKFNKFFGEQEHVLTAEVELADNSHDTSQQMAQ--TNTTNSILNWSRPPIKLDFVIEMFS 429
Query: 324 PSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
SG V++LKV E K NY +KWV+Y +SG YE R
Sbjct: 430 SSGLAVKFLKVQE-KSNYK---TVKWVKYSTQSGSYEIR 464
Score = 36.3 bits (80), Expect = 0.86
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 157 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELS 258
GK+K+ +N I+WK + G +E L+AE+EL+
Sbjct: 359 GKSKFHPEDNVILWKFNKFFGEQEHVLTAEVELA 392
>UniRef50_Q1EQ16 Cluster: Mu 2 subunit isoform 2; n=1; Entamoeba
histolytica|Rep: Mu 2 subunit isoform 2 - Entamoeba
histolytica
Length = 407
Score = 56.0 bits (129), Expect = 1e-06
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Frame = +3
Query: 15 VREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXXXRYR 194
++E +T + + + +++ F G+ + +KIP P T
Sbjct: 270 IKESSKTHLSLDINVRALFSELQYGENVRIKIPVPKNAALCKTRCTAGSAKYHPEHAAIL 329
Query: 195 MEDQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKL 371
G ++T ++W +PPI M F +P +G ++RYLK+
Sbjct: 330 WRISRFNGKTQQTITVDVDLVQTTQSQRWDKPPILMDFVIPALTATGLQIRYLKIA---- 385
Query: 372 NYSDHDVIKWVRYIGRSGLYETR 440
SD+ IKWVRYI ++G + R
Sbjct: 386 --SDYKTIKWVRYITKAGAIQYR 406
Score = 34.3 bits (75), Expect = 3.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 148 CLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELSRPT 267
C G AKY AI+W+I R G + ++ +++L + T
Sbjct: 314 CTAGSAKYHPEHAAILWRISRFNGKTQQTITVDVDLVQTT 353
>UniRef50_A2ER69 Cluster: Adaptor complexes medium subunit family
protein; n=1; Trichomonas vaginalis G3|Rep: Adaptor
complexes medium subunit family protein - Trichomonas
vaginalis G3
Length = 433
Score = 54.8 bits (126), Expect = 2e-06
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Frame = +3
Query: 9 PLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXXXR 188
PLV+++ + K+E++V + SN+ L + VKIP P +
Sbjct: 288 PLVKDISKNKIEIRVSVTSNYDMKLSATPLIVKIPMPENASETQIEQSQGKGVFVGEQNA 347
Query: 189 YRMEDQAHGGHEGDPAVCRD*ALETDTKKKWT---RPPISMGFEVPF-APSGFKVRYLKV 356
+ G L + T + + + PIS F +P + SG ++YLKV
Sbjct: 348 VIWKINGFAGKTQADITIYVTCLASTTNESPSLKIKDPISCEFNIPMLSASGLALQYLKV 407
Query: 357 FEPKLNYSDHDVIKWVRYIGRSGLYETR 440
E K NY+ KW+RY+ ++G YE R
Sbjct: 408 VE-KSNYTPD---KWIRYLTQAGKYEVR 431
>UniRef50_Q99186 Cluster: AP-2 complex subunit mu; n=2;
Saccharomyces cerevisiae|Rep: AP-2 complex subunit mu -
Saccharomyces cerevisiae (Baker's yeast)
Length = 491
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 273 KKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
++WTRPPIS+ FEV F+ SG VRY + S H +KW++YI ++G YE R
Sbjct: 437 QQWTRPPISLEFEVMMFSNSGLVVRYFTISGKD---SKHRAVKWIKYISKAGSYEVR 490
>UniRef50_Q9BXS5 Cluster: AP-1 complex subunit mu-1; n=137;
Eukaryota|Rep: AP-1 complex subunit mu-1 - Homo sapiens
(Human)
Length = 423
Score = 53.6 bits (123), Expect = 5e-06
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Frame = +3
Query: 12 LVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXXXRY 191
++ + +++E + KS FK +E+ IP P++
Sbjct: 282 VIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEI 341
Query: 192 RMEDQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPK 368
++ G + + + K +PPIS+ FE+P F SG +VRYLK+ E
Sbjct: 342 VWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEK- 400
Query: 369 LNYSDHDVIKWVRYIGRSGLYETR 440
S + + WVRYI ++G Y+ R
Sbjct: 401 ---SGYQALPWVRYITQNGDYQLR 421
>UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1;
Schizosaccharomyces pombe|Rep: AP-2 complex subunit mu -
Schizosaccharomyces pombe (Fission yeast)
Length = 446
Score = 53.2 bits (122), Expect = 7e-06
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXX 182
++P+V ++ + K+ ++ +++++ P L + +IP P +
Sbjct: 302 IVPIVEQLSKQKIIYRISIRADY-PHKLSSSLNFRIPVPTNVVKANPRVNRGKAGYEPSE 360
Query: 183 XRYRMEDQAHGGHEGDPAVCRD*ALETDTKKK-WTRPPISMGFEV-PFAPSGFKVRYLKV 356
+ G E + + L T ++ W +PPIS+ F + F SG V+YL+V
Sbjct: 361 NIINWKIPRFLG-ETELIFYAEVELSNTTNQQIWAKPPISLDFNILMFTSSGLHVQYLRV 419
Query: 357 FEPKLNYSDHDVIKWVRYIGRSGLYETR 440
EP + S + IKWVRY R+G E R
Sbjct: 420 SEP--SNSKYKSIKWVRYSTRAGTCEIR 445
Score = 40.7 bits (91), Expect = 0.040
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +1
Query: 154 KGKAKYKASENAIVWKIKRMAGMKETQLSAEIELSRPT 267
+GKA Y+ SEN I WKI R G E AE+ELS T
Sbjct: 351 RGKAGYEPSENIINWKIPRFLGETELIFYAEVELSNTT 388
>UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6;
Saccharomycetales|Rep: AP-1 complex subunit mu-1 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 445
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSG 425
A+ DT+ ++ PI + F +P F SG +VRYL++ EPKL Y + WVRYI +SG
Sbjct: 382 AVMDDTENILSKKPIKVNFSIPYFTTSGIQVRYLRINEPKLQYQSY---PWVRYITKSG 437
>UniRef50_A5JZZ1 Cluster: Clathrin coat assembly protein AP50,
putative; n=2; Plasmodium|Rep: Clathrin coat assembly
protein AP50, putative - Plasmodium vivax
Length = 611
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 291 PISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYE 434
PI++ F++P F SG +RYLKVFE K NY +IKW++Y+ SG+Y+
Sbjct: 565 PITLSFKIPMFTSSGMYIRYLKVFE-KSNYK---IIKWIKYLTESGIYQ 609
>UniRef50_Q6C119 Cluster: Similar to sp|Q00776 Saccharomyces
cerevisiae YPL259c APM1 AP-1 complex subunit; n=1;
Yarrowia lipolytica|Rep: Similar to sp|Q00776
Saccharomyces cerevisiae YPL259c APM1 AP-1 complex
subunit - Yarrowia lipolytica (Candida lipolytica)
Length = 514
Score = 50.0 bits (114), Expect = 7e-05
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Frame = +3
Query: 15 VREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHE--HQRGATDXXXXXXXXXXXXXR 188
V + G T++ + V LKS F+ +EV +P P + R R
Sbjct: 333 VEKKGNTRLLISVKLKSQFRKRSTANDVEVFVPVPPDATSPRFRATAGTVVYMPERNAIR 392
Query: 189 YRMEDQAHGGHE----GDPAVCRD*ALETDTKK-------KWTRPPISMGFEVPF-APSG 332
++++ GG E + +V R + ++ P+ + FE+P+ A SG
Sbjct: 393 WKIKQLQGGGKEFSMKAEISVSRTEEQGESLSELLHLNNTPQSQIPVQVTFEIPYYAMSG 452
Query: 333 FKVRYLKVFEPKLNYSDHDVIKWVRYIGRSG 425
+VRYLKV EP L Y + WVRYI ++G
Sbjct: 453 LQVRYLKVNEPTLKYRS---LPWVRYITKNG 480
Score = 33.1 bits (72), Expect = 8.0
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 157 GKAKYKASENAIVWKIKRM-AGMKETQLSAEIELSR 261
G Y NAI WKIK++ G KE + AEI +SR
Sbjct: 380 GTVVYMPERNAIRWKIKQLQGGGKEFSMKAEISVSR 415
>UniRef50_Q7RAH7 Cluster: Clathrin coat assembly protein ap50; n=5;
Plasmodium (Vinckeia)|Rep: Clathrin coat assembly
protein ap50 - Plasmodium yoelii yoelii
Length = 601
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +3
Query: 291 PISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYE 434
PI++ F++P F SG +RYLKV+E K NY +IKW++Y+ SG Y+
Sbjct: 555 PITLNFKIPMFTSSGMFIRYLKVYE-KSNYK---IIKWIKYLTESGAYQ 599
>UniRef50_Q00776 Cluster: AP-1 complex subunit mu-1 (Mu(1)-adaptin);
n=5; Saccharomycetales|Rep: AP-1 complex subunit mu-1
(Mu(1)-adaptin) - Saccharomyces cerevisiae (Baker's
yeast)
Length = 475
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 291 PISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSG 425
P+ + F++P F SG +VRYLK+ EPKL Y + WVRYI +SG
Sbjct: 425 PVQIKFQIPYFTTSGIQVRYLKINEPKLQYKSY---PWVRYITQSG 467
Score = 34.3 bits (75), Expect = 3.5
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 157 GKAKYKASENAIVWKIKRMAGMKETQLSAEIEL 255
G KY ++AI+WKI+ G KE +SAE+ L
Sbjct: 369 GSLKYVPEKSAILWKIRSFPGGKEYSMSAELGL 401
>UniRef50_A2FR45 Cluster: Mu adaptin, putative; n=1; Trichomonas
vaginalis G3|Rep: Mu adaptin, putative - Trichomonas
vaginalis G3
Length = 426
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/138 (21%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Frame = +3
Query: 30 RTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXXXRYRMEDQA 209
R+++E+ + ++ ++P + Q + +++P P + +
Sbjct: 292 RSRVEMLIRARAQYRPQSVAQNVTIRVPVPPDVDTPKAQCTAGRMRYSPNDNALVWTIKQ 351
Query: 210 HGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVPF-APSGFKVRYLKVFEPKLNYSDH 386
G + +++++ ++ PI + FE+PF SG +V+YLKV E + +
Sbjct: 352 FPGRKQFSLRAHFGLPSVESEEEESKRPIVVNFEIPFFTVSGLRVQYLKVIEQ----TGY 407
Query: 387 DVIKWVRYIGRSGLYETR 440
+ WVRY+ G YE R
Sbjct: 408 QAVTWVRYLTTDGTYEFR 425
Score = 36.7 bits (81), Expect = 0.65
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 148 CLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELSRPTPRRSGRARP 294
C G+ +Y ++NA+VW IK+ G K+ L A L RP
Sbjct: 331 CTAGRMRYSPNDNALVWTIKQFPGRKQFSLRAHFGLPSVESEEEESKRP 379
>UniRef50_Q4RWQ3 Cluster: Chromosome 15 SCAF14981, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 15
SCAF14981, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 128
Score = 48.0 bits (109), Expect = 3e-04
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 264 DTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSG 425
+ + K +PPIS+ FE+P F SG +VRYLK+ E S + + WVRYI ++G
Sbjct: 20 EAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQNG 70
>UniRef50_Q9SGX7 Cluster: F20B24.16; n=4; Magnoliophyta|Rep:
F20B24.16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 411
Score = 48.0 bits (109), Expect = 3e-04
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Frame = +3
Query: 30 RTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXXXRYRMEDQA 209
R+++E+ V +S FK +E+++P P + + Q
Sbjct: 274 RSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQY 333
Query: 210 HGGHEGDPAVCRD*ALETDTKKKWT---RPPISMGFEVP-FAPSGFKVRYLKVFEPKLNY 377
G++ + + D L + ++ T + PI + FE+P F SG +VRYLK+ E K Y
Sbjct: 334 FYGNK-EHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIE-KSGY 391
Query: 378 SDHDVIKWVRYIGRSGLYETR 440
H WVRYI +G YE R
Sbjct: 392 QAHP---WVRYITMAGEYELR 409
>UniRef50_Q4Q1B6 Cluster: Clathrin coat assembly protein-like
protein; n=3; Leishmania|Rep: Clathrin coat assembly
protein-like protein - Leishmania major
Length = 438
Score = 48.0 bits (109), Expect = 3e-04
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Frame = +3
Query: 18 REVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXXXR--Y 191
RE+ +T+ EV+ L+S+ + + ++V + P +
Sbjct: 297 REISKTRTEVEFTLRSDTPAGRVAKDVQVSVACPDNTATAEVKVGHGKAKYDPVSHAIVW 356
Query: 192 RMEDQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFE-VPFAPSGFKVRYLKVFEPK 368
++ + G A R +T+ WT+PPI + F+ V + +G ++ L V EP
Sbjct: 357 KLPEVKSGEEIAFFAEIRQITPTENTELLWTKPPIRIAFQCVSLSLTGLRINELVVKEPT 416
Query: 369 LNYSDHDVIKWVRYIGRSGLYETR 440
L Y+ KW+RY +G Y+ R
Sbjct: 417 LMYT---ASKWIRYTVMAGDYQCR 437
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 124 NTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELSRPT 267
NT+ ++ GKAKY +AIVWK+ + +E AEI PT
Sbjct: 332 NTATAEVKVGHGKAKYDPVSHAIVWKLPEVKSGEEIAFFAEIRQITPT 379
>UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=8;
Eukaryota|Rep: Clathrin coat assembly protein ap54 -
Plasmodium yoelii yoelii
Length = 459
Score = 47.6 bits (108), Expect = 3e-04
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Frame = +3
Query: 33 TKMEVKVVLKSNFKPSLLGQKIEVKIPTPHE----HQR---GATDXXXXXXXXXXXXXRY 191
TK+E V KS FK + +E +P P + H + G ++
Sbjct: 322 TKIEYIVKAKSQFKNKSIANNVEFHLPVPADVDSPHFQTYIGTVKYYPDKDILLWKIKQF 381
Query: 192 R-MEDQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEP 365
+ ++ G P++ + + K + + P+++ FE+P F SG VRYLK+ E
Sbjct: 382 QGQKEYIMNAQFGLPSI-----VSNENKDIYYKRPVNVKFEIPYFTVSGITVRYLKIIEK 436
Query: 366 KLNYSDHDVIKWVRYIGRSGLYETR 440
S + + WVRYI ++G Y+ R
Sbjct: 437 ----SGYQALPWVRYITQNGDYQVR 457
>UniRef50_A0BJZ5 Cluster: Chromosome undetermined scaffold_111,
whole genome shotgun sequence; n=3;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_111, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 439
Score = 46.0 bits (104), Expect = 0.001
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Frame = +3
Query: 3 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXX 182
+ P++ EV +K+EV + LK+ F ++ V+IP P + +
Sbjct: 289 LFPIIEEVSSSKIEVTIKLKACFDAKIIASYANVRIPIPKQTANAYPELVKNAQLETAEY 348
Query: 183 XRYR--MEDQAH---GGHEGDPAVCRD*-ALETDTKKKWTRPPISMGFEVP-FAPSGFKV 341
+ +E Q GG E + A +T + PI+M FE+P F S ++
Sbjct: 349 DSNKKMVEWQIKKLCGGQERSLKIKLTLQATQTAHTARKEIGPIAMNFEIPMFNVSRLQI 408
Query: 342 RYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
+YL++ E + H +WVRYI +S Y R
Sbjct: 409 KYLRIEERGNTTNPH---RWVRYITQSSSYVCR 438
>UniRef50_Q7QZ95 Cluster: GLP_567_48751_50055; n=2; Giardia
intestinalis|Rep: GLP_567_48751_50055 - Giardia lamblia
ATCC 50803
Length = 434
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/147 (20%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Frame = +3
Query: 9 PLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQ--RGATDXXXXXXXXXXXX 182
P+V GR +ME+ + L+ + + + + V +P P
Sbjct: 291 PIVTVHGRNRMEIVLNLRCGIPSNNVAEHVIVSVPMPSNVSDVTAIESLGKCRLRKDGQA 350
Query: 183 XRYRMEDQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVF 359
+R++ G + + + ++W RPP++M F++P + SG +VRY+++
Sbjct: 351 AEWRIKSITGGTTATLSMEVQCVSSSSIDLREWRRPPLAMNFDIPMYTASGIEVRYIRI- 409
Query: 360 EPKLNYSDHDVIKWVRYIGRSGLYETR 440
+ ++ KW+ Y +G Y+ R
Sbjct: 410 ---IAQEGYETEKWLTYKTSAGTYQIR 433
>UniRef50_Q014Q3 Cluster: Clathrin adaptor complexes medium subunit
family protein; n=2; Ostreococcus|Rep: Clathrin adaptor
complexes medium subunit family protein - Ostreococcus
tauri
Length = 452
Score = 43.2 bits (97), Expect = 0.007
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 267 TKKKWTRPPISMGFEVPFAP-SGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
T++K T P+ + FEVP+ SG +V+YLKV E K Y+ + WVRYI RS Y R
Sbjct: 396 TRRK-TSVPVRVSFEVPYTTASGLQVKYLKVIE-KEGYT---ALPWVRYITRSDDYAFR 449
>UniRef50_Q6CIM6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 507
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 294 ISMGFEVPF-APSGFKVRYLKVFEPKLNYSDHDVIKWVRY 410
I+M FE+P+ A SG KV Y K+ EP+LNY WVRY
Sbjct: 457 IAMSFEIPYYAVSGLKVEYFKIEEPQLNYQS---FPWVRY 493
>UniRef50_Q9SB50 Cluster: Clathrin coat assembly like protein; n=7;
Magnoliophyta|Rep: Clathrin coat assembly like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 451
Score = 40.7 bits (91), Expect = 0.040
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Frame = +3
Query: 12 LVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPHEHQRGATDXXXXXXXXXXXXXRY 191
L+ E GR K EV + +++ F ++ I V++P P+ R + +
Sbjct: 305 LIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTDFKES 364
Query: 192 R--ME---DQAHGGHEGDPAVCRD*ALETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLK 353
+E + GG E + E P+SM F +P + S +V+YL+
Sbjct: 365 NKMLEWNLKKIVGGGEHTLRAKLTFSQEFHGNITKEAGPVSMTFTIPMYNVSKLQVKYLQ 424
Query: 354 VFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
+ + +Y+ + +WVRY+ ++ Y R
Sbjct: 425 IAKKSSSYNPY---RWVRYVTQANSYVAR 450
>UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6;
Alveolata|Rep: Clathrin medium chain, putative -
Theileria parva
Length = 452
Score = 39.1 bits (87), Expect = 0.12
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +3
Query: 252 ALETDTKKKWTRPPISMGFEVPF-APSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGL 428
++ +++ +++ P+ + FE+P+ SG V++L++ + K Y + WVRYI ++G
Sbjct: 391 SVSDESRNTFSKNPVKIKFEIPYYTVSGINVKHLRITD-KTGYK---ALPWVRYITKNGD 446
Query: 429 YETR 440
Y+ R
Sbjct: 447 YQLR 450
>UniRef50_Q759G1 Cluster: ADR315Wp; n=1; Eremothecium gossypii|Rep:
ADR315Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 492
Score = 39.1 bits (87), Expect = 0.12
Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Frame = +1
Query: 157 GKAKYKASENAIVWKIKRMAGMKETQLSAEI---ELSRPTPRRSGRARPSPWGSKFPL-- 321
GK K+ ENAI+WKI + G+ E LSA E RP P K +
Sbjct: 358 GKCKFVPEENAIIWKIHKFHGLTENTLSAVTIADEQGHYAQVLDQWPRP-PISMKLEIMM 416
Query: 322 -HPPDSRSAT*RCLNRN*ITRTMTSSSGCATSDAPDSTRRGAERRADGEY*MAS*IATST 498
SAT R + T + T SSG +TS A TR + AD +++ +++ T
Sbjct: 417 FSTAALSSATSRSWRK---TSSTTPSSGSSTSRALAPTRFATDAEADASAFLSATLSSKT 473
Query: 499 NIRKYNKTNH 528
I + T H
Sbjct: 474 -IALHTTTTH 482
>UniRef50_P38700 Cluster: Adaptin medium chain homolog APM2; n=3;
Saccharomycetales|Rep: Adaptin medium chain homolog APM2
- Saccharomyces cerevisiae (Baker's yeast)
Length = 605
Score = 39.1 bits (87), Expect = 0.12
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 294 ISMGFEVPFAP-SGFKVRYLKVFEPKLNYSDHDVIKWVRY 410
+++ FE+P+ SG KV YLKV EP+L Y WVRY
Sbjct: 557 VNIDFEIPYCTCSGLKVEYLKVEEPQLQYQS---FPWVRY 593
>UniRef50_A7TLM0 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 541
Score = 37.9 bits (84), Expect = 0.28
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 294 ISMGFEVPFAP-SGFKVRYLKVFEPKLNYSDHDVIKWVRY 410
++M FEVP++ SG KV YLK+ E ++NY WVRY
Sbjct: 493 LTMKFEVPYSTCSGLKVEYLKIEENQVNYQS---FPWVRY 529
>UniRef50_Q5CWB6 Cluster: Clathrin coat assembly protein AP50; n=2;
Cryptosporidium|Rep: Clathrin coat assembly protein AP50
- Cryptosporidium parvum Iowa II
Length = 548
Score = 37.1 bits (82), Expect = 0.49
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 291 PISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLY 431
P+ + FE+P F S +V+YLK+ E Y + +WVRY+ +S Y
Sbjct: 499 PLFLNFEIPMFNLSNIQVKYLKISE---KYGQQNNYRWVRYVTQSNSY 543
>UniRef50_Q1JSZ4 Cluster: Clathrin coat assembly protein, putative;
n=1; Toxoplasma gondii|Rep: Clathrin coat assembly
protein, putative - Toxoplasma gondii
Length = 517
Score = 37.1 bits (82), Expect = 0.49
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 291 PISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
PISM FE+P F S +VRYL++ E S +WVRY+ +S Y R
Sbjct: 469 PISMTFEIPMFNVSNLQVRYLRIAEKNGVASP---FRWVRYVTQSSSYICR 516
>UniRef50_Q75DH8 Cluster: ABR047Wp; n=1; Eremothecium gossypii|Rep:
ABR047Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 498
Score = 36.3 bits (80), Expect = 0.86
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 294 ISMGFEVPFAP-SGFKVRYLKVFEPKLNYSDHDVIKWVRY 410
+ + FEVP+ SG KV +LK+ EP+L Y W+RY
Sbjct: 450 LRVDFEVPYHTISGLKVEFLKILEPQLQYQS---FPWIRY 486
>UniRef50_A5K4K8 Cluster: Adapter-related protein complex 4 mu 1
subunit, putative; n=6; Plasmodium|Rep: Adapter-related
protein complex 4 mu 1 subunit, putative - Plasmodium
vivax
Length = 496
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 291 PISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
PI + FE+P F S +++YL++ E +Y + +WVRYI +S Y R
Sbjct: 447 PIYILFEIPMFNLSKLRIKYLRIIE---SYKSSNTHRWVRYITQSSSYVYR 494
>UniRef50_P12752 Cluster: Uncharacterized protein in phr 5'region;
n=1; Streptomyces griseus|Rep: Uncharacterized protein
in phr 5'region - Streptomyces griseus
Length = 238
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +1
Query: 229 TQLSAEIELSRPTPRRSGRARPSPWGSKFPLHPPDSRSAT*RCLNRN 369
T SA +RP PRR G RP P GS P P S C R+
Sbjct: 12 TSSSATWRTARPAPRRCGSCRPPPPGSASPSPRPRRASCATGCCGRS 58
>UniRef50_A2QH25 Cluster: Catalytic activity: hydrolysis of
terminal; n=6; Ascomycota|Rep: Catalytic activity:
hydrolysis of terminal - Aspergillus niger
Length = 846
Score = 33.9 bits (74), Expect = 4.6
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = -2
Query: 324 VQRELRTPWRWAGASTSSWCRSRELNLGRQLGLLHARHALDLPYDSVLRGFILRFPLQAN 145
+Q LR W W G S W + + +HA L++P + RG L + AN
Sbjct: 224 LQGILREEWGWEGLLMSDWFGTYSTS-----EAIHAGLDLEMPGPTRWRGGALTHAITAN 278
Query: 144 QLHPAGVHAELESSLRSSVRAGRA 73
++ A V+A + + LR +A R+
Sbjct: 279 KIPMATVNARVRAVLRLVQQASRS 302
>UniRef50_Q9LQD4 Cluster: F28C11.2; n=8; core eudicotyledons|Rep:
F28C11.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 344
Score = 33.5 bits (73), Expect = 6.1
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -3
Query: 416 SDVAHPLDDV--MVRVIQFRFKHLQVADLESGGCKGNFEPHGDGRARPLLLG-VGLESSI 246
SD+A P D+ + I+ + ++L + G G PHGD PLL G + I
Sbjct: 157 SDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSGGMSPHGDKTISPLLTNDNGEDGVI 216
Query: 245 SADSWVS 225
S+D +S
Sbjct: 217 SSDEELS 223
>UniRef50_A4R295 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 522
Score = 33.5 bits (73), Expect = 6.1
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Frame = +1
Query: 208 RMAGMKETQLSAEIELSRPTPRRSGRARPSPWGSKFPLHP----PDSRSAT*RCLNRN*I 375
R +E Q +++ E PTPR+ A S S+ P P RS+ RCLN+N
Sbjct: 6 RQKRRREAQGASQFEADAPTPRKRPTAEVSRPESENPASRSETLPPQRSSKRRCLNQNDS 65
Query: 376 TRTMTSSSGCATSDAPDSTRRGAERRADGE 465
S RRG R+ GE
Sbjct: 66 EAADESGVHTGGGRTEPRKRRGRPSRSAGE 95
>UniRef50_P75168 Cluster: Phosphoenolpyruvate-protein
phosphotransferase; n=10; Mycoplasma|Rep:
Phosphoenolpyruvate-protein phosphotransferase -
Mycoplasma pneumoniae
Length = 572
Score = 33.5 bits (73), Expect = 6.1
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = -3
Query: 500 FVLVAIHEAI*YSPSARRSAPRLVESGASDVAHPLDDVMVRVIQFRFKHLQVADLESGGC 321
F + ++ I YS +A R + S + PL+ ++++I + +V D+ +G C
Sbjct: 444 FFSIGTNDLIQYSFAADR-----MNKNVSYLYQPLNPALLKLIYLTIEGGKVNDIWTGMC 498
Query: 320 KGNFEPHGDGRARPLLLGVGL-ESSISADS 234
E G+ A PLLLG+GL E S+SA S
Sbjct: 499 G---EMAGEPLAIPLLLGLGLKEFSMSASS 525
>UniRef50_Q8G817 Cluster: N utilization substance protein B homolog;
n=2; Bifidobacterium|Rep: N utilization substance
protein B homolog - Bifidobacterium longum
Length = 190
Score = 33.5 bits (73), Expect = 6.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 281 DAPAHLHGVRSSLCTLRIQGPLPEGV*TETE 373
D+PA +HG+ S++CT + P PE V E +
Sbjct: 116 DSPAFIHGLLSAVCTAKNAAPAPESVAEEAD 146
>UniRef50_Q2R137 Cluster: Expressed protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice)
Length = 245
Score = 33.1 bits (72), Expect = 8.0
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 SRPTPRRSGRARPSPWGSKFPLHPPDSRSAT*RCLNRN*I-TRTMTSSSGCATSDAPDST 432
S T SG PSPWGS P PP S C + +R M + + +TS A S
Sbjct: 167 SAMTASASGVTSPSPWGSA-PTTPPRSSRHRPTCTATSAASSRRMRAPTSRSTSPATSSP 225
Query: 433 RRGA 444
R GA
Sbjct: 226 RTGA 229
>UniRef50_A7PVY2 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 304
Score = 33.1 bits (72), Expect = 8.0
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +1
Query: 76 PPCSDRRSK*RFQLRMNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIEL 255
PP DRR+ LR+ T G LIC +G+ + K + +E S E+ L
Sbjct: 43 PPADDRRTS---DLRVQTDG--LICSEGEG---VGAKKVSSKDHEIGVGEEEGGSEEMGL 94
Query: 256 SRPTPRRSGRARPSP 300
+ P+ RRS + PSP
Sbjct: 95 ASPSNRRSSNSSPSP 109
>UniRef50_Q383N0 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 605
Score = 33.1 bits (72), Expect = 8.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 351 KVFEPKLNYSDHDVIKWVRYIGRSGLYETRC*ATRGR*VLNGFVNRNE 494
+ F P++N + KW Y+G S Y C + + N VN NE
Sbjct: 104 ETFHPEINPRSQRITKWENYVGNSERYHAICELVKELWLANAPVNGNE 151
>UniRef50_Q09934 Cluster: Putative uncharacterized protein ptr-13;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein ptr-13 - Caenorhabditis elegans
Length = 851
Score = 33.1 bits (72), Expect = 8.0
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = -2
Query: 615 ITLFYYE---YSLI-EMKRKIIYSIAITLNCICMVCFVV 511
ITLF Y+ Y LI +K +++ S+AIT C+ + CFV+
Sbjct: 651 ITLFDYDGTIYDLIITVKGELVKSLAITFTCMTIACFVI 689
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,382,952
Number of Sequences: 1657284
Number of extensions: 15313128
Number of successful extensions: 46328
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 44265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46277
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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