Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30153
         (781 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   6.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   6.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.4  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 206 LIFHTIAFSEALYFA 162
           +IFH I F+  LYFA
Sbjct: 46  IIFHLILFAVLLYFA 60



 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 764 GYLLMFKTVVYSMC 723
           G L+ F T+V+S C
Sbjct: 260 GCLIQFNTIVFSFC 273


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 562 IQHSYYIKLYLYGLFCCIFEYSYSLRFTK 476
           + H  ++ +++  ++C I E    L FTK
Sbjct: 120 VAHLLFLVIFVLNIWCWIVEIGGWLAFTK 148


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 565 YIQHSYYIKLY 533
           Y++H+YY +LY
Sbjct: 63  YVRHTYYRRLY 73


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 565 YIQHSYYIKLY 533
           Y++H+YY +LY
Sbjct: 63  YVRHTYYRRLY 73


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 213 HALDLPYDSVLRGFILRFPLQANQLHPAGVH 121
           H +D+P ++++   ++    Q N  HP  +H
Sbjct: 570 HKVDIPLNAIVEIVLVDEVQQPNLSHPFHLH 600


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,746
Number of Sequences: 336
Number of extensions: 3702
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)