Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30152X
         (524 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3105|AAS65193.1|  178|Drosophila melanogaster CG33335-P...    31   1.3  

>AE014297-3105|AAS65193.1|  178|Drosophila melanogaster CG33335-PA
           protein.
          Length = 178

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = -1

Query: 470 YVQRLKINNYVYKICSTVYNYSSCSVRSHVYNYAIHFVCRKYGQQKNTVYFNYISCEARV 291
           +++ L+    +Y  C TV   +SCS   H+ N      C++ G ++   Y  Y   EA  
Sbjct: 67  FIEPLENVAKIYDACDTV---NSCSTPKHISNVWHDLECQRIGSEEG--YLLYPELEATG 121

Query: 290 RSSDYR 273
           R +D R
Sbjct: 122 RRADRR 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,096,172
Number of Sequences: 53049
Number of extensions: 437979
Number of successful extensions: 937
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)