Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30151
(487 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 130 1e-29
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 125 5e-28
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 124 1e-27
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 110 2e-23
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 108 8e-23
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 100 2e-20
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 100 3e-20
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 98 8e-20
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 96 4e-19
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 95 7e-19
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 92 7e-18
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 92 7e-18
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 92 7e-18
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 87 3e-16
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 79 7e-14
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 78 9e-14
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 77 3e-13
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 76 4e-13
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 68 1e-10
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 63 3e-09
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 57 2e-07
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 56 6e-07
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 55 1e-06
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 36 0.37
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.64
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.64
UniRef50_Q6AHV1 Cluster: Inositol phosphorylceramide synthase (A... 36 0.64
UniRef50_Q08W76 Cluster: Hydrogen peroxide-inducible genes activ... 34 1.5
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 34 1.5
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 34 2.0
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 34 2.0
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 34 2.0
UniRef50_Q3J7H8 Cluster: ABC transporter, inner membrane subunit... 33 2.6
UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protei... 33 3.4
UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 33 4.5
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 33 4.5
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 4.5
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 33 4.5
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 33 4.5
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 4.5
UniRef50_A3DJZ0 Cluster: HAD-superfamily hydrolase, subfamily IA... 32 6.0
UniRef50_Q6YTT4 Cluster: Proliferating-cell nucleolar antigen-li... 32 6.0
UniRef50_A2YWD8 Cluster: Putative uncharacterized protein; n=2; ... 32 6.0
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 32 6.0
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 32 7.9
UniRef50_A0DD57 Cluster: Chromosome undetermined scaffold_46, wh... 32 7.9
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 7.9
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 130 bits (315), Expect = 1e-29
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 202
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 203 KIHKRSKIKPFVKVVNY 253
KI KRSKIK FVKV NY
Sbjct: 61 KIAKRSKIKSFVKVYNY 77
Score = 79.0 bits (186), Expect = 5e-14
Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +1
Query: 193 GKE*NPQEVQDKAFREGCKLYHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVR 366
GK+ + + K+F + HLMPTRY+VD +K KD+ +DPA ++K R +V+
Sbjct: 58 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 367 FEERYKSGKNKWFFQKLRF 423
FEERYK+GKNKWFFQKLRF
Sbjct: 118 FEERYKTGKNKWFFQKLRF 136
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 125 bits (302), Expect = 5e-28
Identities = 55/73 (75%), Positives = 65/73 (89%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 202
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+V +RM K
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKT 60
Query: 203 KIHKRSKIKPFVK 241
++HKRSKIKPF+K
Sbjct: 61 RLHKRSKIKPFIK 73
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 124 bits (299), Expect = 1e-27
Identities = 57/77 (74%), Positives = 65/77 (84%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 202
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP KV K MGK
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
Query: 203 KIHKRSKIKPFVKVVNY 253
KI KR+K+KPF+KVV+Y
Sbjct: 61 KIEKRNKLKPFLKVVSY 77
Score = 75.4 bits (177), Expect = 6e-13
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +1
Query: 169 PPESAQEDGKE*NPQEVQDKAFREGCKLYHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 342
P + ++ GK+ + + K F + HL+PTRY+VD +F+K + + LK P+K++K
Sbjct: 50 PLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRK 109
Query: 343 LRFNTRVRFEERYKSGKNKWFFQKLRF 423
+ +FEERYK+GKNKWFF KLRF
Sbjct: 110 ALVEVKSKFEERYKTGKNKWFFTKLRF 136
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 110 bits (264), Expect = 2e-23
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 202
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPRKV MGK
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 203 KIHKRSKIKPFVKVVNY 253
K +R+++K F K +NY
Sbjct: 61 KFERRTRVKAFAKFINY 77
Score = 46.4 bits (105), Expect = 3e-04
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +1
Query: 193 GKE*NPQEVQDKAFREGCKLYHLMPTRYTVD-FSFEK---FSAKDLKDPAKRKKLRFNTR 360
GK+ + + KAF + HLM TRY+V F +K F K+ + RK+ + +
Sbjct: 58 GKKKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQ 117
Query: 361 VRFEERYKSGKNKWFFQKLRF 423
ER+ + KN+WFF KLRF
Sbjct: 118 TVMRERFLAAKNRWFFTKLRF 138
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 108 bits (259), Expect = 8e-23
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 202
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP KV K+ G
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 203 KIHKRSKIKPFVKVVNY 253
K+ KR+KIKPF+KVVNY
Sbjct: 61 KVAKRTKIKPFIKVVNY 77
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 169 PPESAQEDGKE*NPQEVQDKAFREGCKLYHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 342
P + ++ G + + + K F + HL+PTRYT+D K S + + P++R++
Sbjct: 50 PSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREE 109
Query: 343 LRFNTRVRFEERYKSGKNKWFFQKLRF 423
+ + FEER+++GKN+WFF KLRF
Sbjct: 110 AKKVVKKAFEERHQAGKNQWFFSKLRF 136
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 100 bits (239), Expect = 2e-20
Identities = 41/77 (53%), Positives = 60/77 (77%)
Frame = +2
Query: 20 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 199
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P KVHKR+ K
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSK 76
Query: 200 NKIHKRSKIKPFVKVVN 250
K+ K+S IKPF+K +N
Sbjct: 77 EKLKKKSTIKPFLKSIN 93
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 99.5 bits (237), Expect = 3e-20
Identities = 40/78 (51%), Positives = 61/78 (78%)
Frame = +2
Query: 17 SKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMG 196
+ G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+KV KRMG
Sbjct: 14 ASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMG 73
Query: 197 KNKIHKRSKIKPFVKVVN 250
KI KR+ +KPF+K VN
Sbjct: 74 SKKIQKRTSVKPFIKYVN 91
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 98.3 bits (234), Expect = 8e-20
Identities = 42/77 (54%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Frame = +2
Query: 29 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPRKVHKRMGKN 202
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR + + M +
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRK 63
Query: 203 KIHKRSKIKPFVKVVNY 253
I KR+ I+ FVKVVNY
Sbjct: 64 TILKRTAIRSFVKVVNY 80
Score = 44.4 bits (100), Expect = 0.001
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = +1
Query: 256 HLMPTRYTVDFSFEK-FSAK------DLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQK 414
H+MPTRY + E F+ + AKR R + FE ++K+GK+KWFF K
Sbjct: 82 HIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAVKKIFEAKHKAGKSKWFFSK 141
Query: 415 LRF 423
LRF
Sbjct: 142 LRF 144
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 95.9 bits (228), Expect = 4e-19
Identities = 40/75 (53%), Positives = 56/75 (74%)
Frame = +2
Query: 29 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 208
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP KV +RMGK +
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMV 112
Query: 209 HKRSKIKPFVKVVNY 253
KRS+IKPF+K+VNY
Sbjct: 113 EKRSRIKPFIKIVNY 127
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 169 PPESAQEDGKE*NPQEVQDKAFREGCKLYHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 342
P + + GK+ + + K F + HLMPTRYT++ K S + K+ + R+
Sbjct: 100 PLKVTRRMGKKMVEKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTRED 159
Query: 343 LRFNTRVRFEERYKSGKNKWFFQKLRF 423
+ + E+RY SGKN+WFF LRF
Sbjct: 160 AKKTVKKALEDRYTSGKNRWFFTPLRF 186
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 95.1 bits (226), Expect = 7e-19
Identities = 38/75 (50%), Positives = 59/75 (78%)
Frame = +2
Query: 29 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 208
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+KV + M K I
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTI 61
Query: 209 HKRSKIKPFVKVVNY 253
+RS++ F++VVN+
Sbjct: 62 QRRSRVGVFLRVVNH 76
Score = 55.6 bits (128), Expect = 6e-07
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +1
Query: 256 HLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 423
H +PTRY +D S E ++ D +K+ + + R F+ RY +G N+WFFQ+LRF
Sbjct: 78 HFLPTRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYNAGSNRWFFQRLRF 133
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 91.9 bits (218), Expect = 7e-18
Identities = 39/72 (54%), Positives = 56/72 (77%)
Frame = +2
Query: 35 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHK 214
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P KV K+M K KI K
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIK 156
Query: 215 RSKIKPFVKVVN 250
RSK+K FVK +N
Sbjct: 157 RSKVKAFVKYIN 168
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 91.9 bits (218), Expect = 7e-18
Identities = 40/77 (51%), Positives = 58/77 (75%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 202
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP+KV + M K
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQ 60
Query: 203 KIHKRSKIKPFVKVVNY 253
I +RS++ F++VVN+
Sbjct: 61 TIARRSQVGVFLRVVNH 77
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +1
Query: 256 HLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 423
H +PTRY VD S E ++ D +KR + + R F+ RY +G + WFFQ+LRF
Sbjct: 79 HFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF 134
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 91.9 bits (218), Expect = 7e-18
Identities = 39/77 (50%), Positives = 59/77 (76%)
Frame = +2
Query: 20 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 199
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYPRKV KRMG+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 200 NKIHKRSKIKPFVKVVN 250
+I KR+ +K F+K +N
Sbjct: 959 KQIRKRTTLKVFIKQLN 975
Score = 39.1 bits (87), Expect = 0.052
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 226 KAFREGCKLYHLMPTRYTVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY 381
K F + L H+MPTRY ++ S E+ +LK+ KRK+LR N R E+Y
Sbjct: 968 KVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRKNLRKYLAEKY 1027
Query: 382 ----------KSGKNKWFFQKLRF 423
K ++++ F KLRF
Sbjct: 1028 RTLPAGSLADKKAQSRFLFSKLRF 1051
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 86.6 bits (205), Expect = 3e-16
Identities = 39/76 (51%), Positives = 55/76 (72%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 202
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P KV K+M
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 203 KIHKRSKIKPFVKVVN 250
KI KR K+K FVK VN
Sbjct: 61 KIEKRLKLKAFVKYVN 76
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 226 KAFREGCKLYHLMPTRYTVDFSFEK---FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 396
KAF + + HLMPTRY V + + S + +++ + RK+ R + + EE + + +N
Sbjct: 69 KAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSVKAVLEECFSNPEN 128
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 78.6 bits (185), Expect = 7e-14
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +2
Query: 38 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKR 217
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PRKV +N +H+
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRC 78
Query: 218 SKIKPF 235
++ PF
Sbjct: 79 ARTAPF 84
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 226 KAFREGCKLYHLMPTRYTVDFSFEKFSAKDLKDPAKRK-KLRFNTRVRFEERYKSGKNKW 402
K F + HLMPTRYT+D +F+ D+ D A +K + + EER+K+GK++W
Sbjct: 118 KTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQKEAKKLLEERFKTGKSRW 177
Query: 403 FFQKLRF 423
FF +L F
Sbjct: 178 FFTRLAF 184
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 78.2 bits (184), Expect = 9e-14
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 226
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP+KV KRMG KI KRSK+
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKV 122
Query: 227 KPFVKVVNY 253
KPFVKV++Y
Sbjct: 123 KPFVKVISY 131
Score = 56.0 bits (129), Expect = 4e-07
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +1
Query: 226 KAFREGCKLYHLMPTRYTVDFSFEKFSAKD--LKDPAKRKKLRFNTRVRFEERYKSGKNK 399
K F + HLMPTRY ++ K + K+P++R+ + + FEE+Y SGKNK
Sbjct: 123 KPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGKNK 182
Query: 400 WFFQKLRF 423
WFF LRF
Sbjct: 183 WFFTPLRF 190
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 76.6 bits (180), Expect = 3e-13
Identities = 32/74 (43%), Positives = 54/74 (72%)
Frame = +2
Query: 32 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 211
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M +
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLV 62
Query: 212 KRSKIKPFVKVVNY 253
K++++K FVK VN+
Sbjct: 63 KKTQVKLFVKAVNF 76
Score = 35.9 bits (79), Expect = 0.49
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +1
Query: 211 QEVQDKAFREGCKLYHLMPTRYTV---DFSFEKFSAKD----LKDPAKRKKLRFNTRVRF 369
++ Q K F + H+M TR+ V DF F+K S + LKD +K L
Sbjct: 63 KKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDAPAKKALLTEYAAVL 121
Query: 370 EERYKSGKNKWFFQKLRF 423
++Y + K WFF+ L+F
Sbjct: 122 RQKYLNNKMAWFFKPLQF 139
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 76.2 bits (179), Expect = 4e-13
Identities = 33/76 (43%), Positives = 50/76 (65%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 202
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P K+ ++M
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAK 60
Query: 203 KIHKRSKIKPFVKVVN 250
R+ +K F KV+N
Sbjct: 61 VQEMRTSVKSFCKVIN 76
Score = 38.3 bits (85), Expect = 0.091
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Frame = +1
Query: 226 KAFREGCKLYHLMPTRYTVDFSFEKFSA-KDLK----DPAKRKKLRFNTRV--RFEERYK 384
K+F + + H+MPT+YTV+ E+F+ K +K + K + + +F E Y+
Sbjct: 69 KSFCKVINVNHVMPTKYTVNL--EQFNLIKQVKINNFEAGKVYPISQKKAISSQFAEEYR 126
Query: 385 SGKNKWFFQKLRF 423
GK W F KLRF
Sbjct: 127 KGKESWLFTKLRF 139
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 67.7 bits (158), Expect = 1e-10
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = +2
Query: 80 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNY 253
G +I+ + D+GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV V NY
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNY 61
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/77 (44%), Positives = 43/77 (55%)
Frame = +1
Query: 193 GKE*NPQEVQDKAFREGCKLYHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 372
G+ N Q VQ++ GC H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 373 ERYKSGKNKWFFQKLRF 423
E KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 57.2 bits (132), Expect = 2e-07
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYD-EGTSDKPYGHAFVAGIDRYPRKVHKRMGK 199
M I K G+VV+VLSG+YAG+KA V+KN + E +K + GI + +K+ M K
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKNSNIESLCEK---KIIILGIKKEMKKIKYNMSK 57
Query: 200 NKIHKRSKIKPFVKVVN--YIT*CQHVIQLTSALK 298
KI + K F+K +N ++ ++VI+ K
Sbjct: 58 RKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFK 92
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 55.6 bits (128), Expect = 6e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2
Query: 98 VKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVN 250
+K +E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLN 186
Score = 37.9 bits (84), Expect = 0.12
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 18/84 (21%)
Frame = +1
Query: 226 KAFREGCKLYHLMPTRYTVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY 381
K F + L H+MPTRY ++ S E+ +LK+ KRK LR N R E+Y
Sbjct: 179 KVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKEAELKNVEKRKDLRKNLRKYLAEKY 238
Query: 382 ----------KSGKNKWFFQKLRF 423
K ++++ F KLRF
Sbjct: 239 RTLPAGSLADKKAQSRFLFSKLRF 262
Score = 32.7 bits (71), Expect = 4.5
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +2
Query: 20 KMGKIMKPGKVVLVLSGRYAG 82
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 54.8 bits (126), Expect = 1e-06
Identities = 35/112 (31%), Positives = 59/112 (52%)
Frame = +2
Query: 32 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 211
I+KPG V +VL GR+AG+KA++V+ ++ +A VAGI PR++ M +
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEALPH---NERGSYAIVAGIAALPRRITNSMSDEEAV 61
Query: 212 KRSKIKPFVKVVNYIT*CQHVIQLTSALKNSAQKT*KTLQNVRSCVSTREYV 367
R +++ FVK +N H++ + L+N+ + T Q V RE +
Sbjct: 62 CRGRVRSFVKCMN----VNHLMPTSCRLENNYKDFIST-QTVADVTKRREII 108
Score = 36.3 bits (80), Expect = 0.37
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 226 KAFREGCKLYHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 402
++F + + HLMPT ++ +++ F S + + D KR+++ F+ R ++ W
Sbjct: 67 RSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRRILEHRDTW 126
Query: 403 FFQKL 417
FF KL
Sbjct: 127 FFTKL 131
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 36.3 bits (80), Expect = 0.37
Identities = 11/36 (30%), Positives = 28/36 (77%)
Frame = +2
Query: 11 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 118
+P+K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 50 HPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 35.5 bits (78), Expect = 0.64
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 11 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDR-YPRKVHK 187
Y + +I + V +V++ RY G+ + E D+P GHAF AG+D R+V K
Sbjct: 212 YAYAIARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVDAGIMRRVGK 271
Query: 188 RMGK 199
G+
Sbjct: 272 FTGR 275
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.64
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 29 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 118
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q6AHV1 Cluster: Inositol phosphorylceramide synthase
(Aur1), putative; n=1; Pneumocystis carinii|Rep:
Inositol phosphorylceramide synthase (Aur1), putative -
Pneumocystis carinii
Length = 440
Score = 35.5 bits (78), Expect = 0.64
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = -2
Query: 345 QLLTFCRVFQVFC-AEFFKAEVNCITCWHQVI*FTTFTKGFILDL-LWILFFPILLCTFR 172
++ +FCR + + E+F + V CI C ++ F K FI+ L + +L FPI FR
Sbjct: 50 RIFSFCRSYSLISYIEYFFSAVICIFCL-SILPCIGFIKIFIVLLYVLLLIFPITRMFFR 108
Query: 171 GYLSIPATKACPYGLSEVPSS 109
+L I + Y +PSS
Sbjct: 109 PFLPIVSWLILFYACRFIPSS 129
>UniRef50_Q08W76 Cluster: Hydrogen peroxide-inducible genes
activator OxyR; n=1; Stigmatella aurantiaca DW4/3-1|Rep:
Hydrogen peroxide-inducible genes activator OxyR -
Stigmatella aurantiaca DW4/3-1
Length = 228
Score = 34.3 bits (75), Expect = 1.5
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 84 ARLS*SRITTKVPPTSRTGMLSSLVSTGTPGKCTRGWERIKSTRGPR 224
+R S + TT+ +SRTG + S +C R WER++ T GPR
Sbjct: 185 SRSSCATWTTRTSSSSRTG----IASAAKRWRCARAWERMRWTSGPR 227
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 34.3 bits (75), Expect = 1.5
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 247 KLYHLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 402
+L HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1625 QLIHLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 33.9 bits (74), Expect = 2.0
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 44 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFV 151
GK++ L+G+YAG+ +VK+Y + + K + H V
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLV 43
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 33.9 bits (74), Expect = 2.0
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 HLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERYKSGKNKWFFQKLRF 423
HL+ TRY D ++D A+ KK+ N T+ + +K K K+ F L F
Sbjct: 70 HLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAWKENKAKFLFSSLSF 126
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 41 PGKVVLVLSGRYAGRKAIVVKNYDE 115
P +V+V SG+ AG+KA+V+K DE
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE 29
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 33.9 bits (74), Expect = 2.0
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +2
Query: 14 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 121
P K+ + PG V+++L+GR+ G++ + +K+ ++ T
Sbjct: 27 PQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
>UniRef50_Q3J7H8 Cluster: ABC transporter, inner membrane subunit
precursor; n=1; Nitrosococcus oceani ATCC 19707|Rep: ABC
transporter, inner membrane subunit precursor -
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Length = 458
Score = 33.5 bits (73), Expect = 2.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 240 FTKGFILDLLWILFFPILLCTFRGY 166
F +GF+LD LW L P+L T+ G+
Sbjct: 313 FVRGFLLDRLWHLVLPVLCLTYSGF 337
>UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protein;
n=1; gamma proteobacterium HTCC2207|Rep: Short chain
dehydrogenase family protein - gamma proteobacterium
HTCC2207
Length = 282
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 159 IPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEG 13
IP+T A PY S+ + + YR ++ S PG I PIL G
Sbjct: 151 IPSTNAVPYSTSKFAVVGLSQALRIEAEYRGVRVSALCPGAIQTPILTG 199
>UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 192
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 85 QGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDKAFREGCK 249
Q Y ++ R+RY Q RA R+W R+ E +E + Q + +RE K
Sbjct: 49 QRYPPRQARQRYCSQGCRAAARKWSRRKAQERYRETAAGQQKRNGQSRRYRERVK 103
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 32.7 bits (71), Expect = 4.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 14 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 118
P+K+ +K G +V++L+G + G + +V+K D G
Sbjct: 65 PTKLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 32.7 bits (71), Expect = 4.5
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 14 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 118
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 71 PTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 4.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 265 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 351
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 4.5
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +2
Query: 14 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 118
P+ + KI+ PG+V+++LSGR+ G++ + +K G
Sbjct: 52 PATLRKIV-PGQVLILLSGRFQGKRVVFLKQLKSG 85
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 32.7 bits (71), Expect = 4.5
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 14 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 118
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 82 PAKLRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 4.5
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 23 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 115
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_A3DJZ0 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Clostridium thermocellum ATCC 27405|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 223
Score = 32.3 bits (70), Expect = 6.0
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 229 AFREGCKLYHLMPTRYT--VDFSFEKFSAKDLKDPAKR 336
A R GC +PT YT DFSF + AKDLKD A++
Sbjct: 175 AVRAGCYTI-AVPTVYTNKQDFSFVNYVAKDLKDAAEK 211
>UniRef50_Q6YTT4 Cluster: Proliferating-cell nucleolar antigen-like
protein; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Proliferating-cell nucleolar
antigen-like protein - Oryza sativa subsp. japonica
(Rice)
Length = 812
Score = 32.3 bits (70), Expect = 6.0
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 73 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQ--EDGKE*NPQEVQDKAFREGC 246
V G+ G + ++RR+L QA+ + +R R PP +A E + P +++ AF E
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEEYY 83
Query: 247 KLYHLMPTRYTVDF 288
K ++ DF
Sbjct: 84 KEQRIVREEEWDDF 97
>UniRef50_A2YWD8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 662
Score = 32.3 bits (70), Expect = 6.0
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 73 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQ--EDGKE*NPQEVQDKAFREGC 246
V G+ G + ++RR+L QA+ + +R R PP +A E + P +++ AF E
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEEYY 83
Query: 247 KLYHLMPTRYTVDF 288
K ++ DF
Sbjct: 84 KEQRIVREEEWDDF 97
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 REYPS--KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 118
R+Y S K+ + +KPG V+++L+G Y G++ +++K G
Sbjct: 32 RKYASVPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSG 71
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 286 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 387
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.9 bits (69), Expect = 7.9
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +2
Query: 8 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 103
EY + + K PG + ++L+GR+ GR+A+++K
Sbjct: 25 EYTT-LRKSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_A0DD57 Cluster: Chromosome undetermined scaffold_46, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_46,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 465
Score = 31.9 bits (69), Expect = 7.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 238 EGCKLYHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 402
+GC L++L Y +FS + S ++ + R TR+RF ER +NKW
Sbjct: 329 QGCYLHYLFAKEYNGEFSIGRCSENSIRINSNTIS-RKQTRIRFNER----ENKW 378
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 7.9
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +2
Query: 41 PGKVVLVLSGRYAGRKAIVVKNYDEG 118
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,217,197
Number of Sequences: 1657284
Number of extensions: 9449553
Number of successful extensions: 28797
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 27997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28779
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -