Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30150
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    26   0.39 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.51 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   6.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   6.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.3  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 640 RRAGMATNSRLPSPINFLASHRKGF 566
           +RAG  T S +  P+  +  HR GF
Sbjct: 183 KRAGPRTESAVYEPVRIMGVHRPGF 207


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 498 SFRLNFSVFNIHFV 457
           SFR+NF++FN++ V
Sbjct: 112 SFRMNFAIFNLYMV 125


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 380 LRTKMYLTGIEIWSVYVKVSLLSCAETKWILK 475
           + T  Y+TGI +W + +  + +  A  K+  K
Sbjct: 123 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 154


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 380 LRTKMYLTGIEIWSVYVKVSLLSCAETKWILK 475
           + T  Y+TGI +W + +  + +  A  K+  K
Sbjct: 356 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 387


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 380 LRTKMYLTGIEIWSVYVKVSLLSCAETKWILK 475
           + T  Y+TGI +W + +  + +  A  K+  K
Sbjct: 356 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 387


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 676 TKLKKIFKMHKILL 717
           T +KK+F +HKIL+
Sbjct: 131 TTIKKLFNLHKILV 144


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 341 DNVLSSCST*PLELRTKMYL 400
           D  L+S    P+++RTK+YL
Sbjct: 107 DETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 341 DNVLSSCST*PLELRTKMYL 400
           D  L+S    P+++RTK+YL
Sbjct: 103 DETLNSKPLKPVKIRTKVYL 122


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = -2

Query: 166 CFASTTISYQYTLECGHIICHFRCFIAILLRDCIRKSRFNSFQSKV 29
           CF S   ++ +      I C F   I + +    RK R N   S +
Sbjct: 63  CFNSYMYAFTHIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDSNI 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,226
Number of Sequences: 336
Number of extensions: 4577
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)