Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30149
(588 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 120 3e-26
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 119 6e-26
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 105 1e-21
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 103 2e-21
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 100 3e-20
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 97 4e-19
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 95 1e-18
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 93 3e-18
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 91 2e-17
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 90 3e-17
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 84 2e-15
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 82 1e-14
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 82 1e-14
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 74 3e-12
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 74 3e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 50 4e-05
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 44 0.002
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 37 0.30
UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.70
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 36 0.93
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 34 2.1
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ... 33 3.7
UniRef50_UPI00005A2BBE Cluster: PREDICTED: similar to Protection... 33 3.7
UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,... 33 4.9
UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_UPI000016262A Cluster: unknown protein; n=1; Arabidopsi... 33 6.5
UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome s... 33 6.5
UniRef50_Q9S9L5 Cluster: F26C17.6 protein; n=1; Arabidopsis thal... 33 6.5
UniRef50_Q6QQB2 Cluster: Vitellogenin; n=4; Metapenaeus ensis|Re... 33 6.5
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 33 6.5
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 32 8.6
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 120 bits (288), Expect = 3e-26
Identities = 58/90 (64%), Positives = 68/90 (75%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR P TVL++G +
Sbjct: 80 GAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPK 138
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
NAREAV+HFGPAPG P SHTKPYVR+K K
Sbjct: 139 NAREAVKHFGPAPGVPHSHTKPYVRSKGRK 168
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +2
Query: 26 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 205
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 206 MKKPTXEGLIAVVVG 250
M+ EG I VVVG
Sbjct: 68 MQ--GKEGKIGVVVG 80
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 119 bits (286), Expect = 6e-26
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
RE RHFG APG P SHTKPYVR+K K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 93.9 bits (223), Expect = 2e-18
Identities = 47/84 (55%), Positives = 54/84 (64%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTXEGLIAVVVGT 253
S+SR+ R MK P E AVVVGT
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGT 85
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 105 bits (251), Expect = 1e-21
Identities = 51/90 (56%), Positives = 61/90 (67%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+D RL+ M V AL TE AR RI+ AGGE LTFDQLALR PTGK +L++G
Sbjct: 139 GSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPT 198
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
AR A +HFG APG P+S +PYVR+K K
Sbjct: 199 KARTAEKHFGSAPGRPKSKARPYVRSKGRK 228
Score = 43.2 bits (97), Expect = 0.005
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTXEGLIAVVVGT 253
T+ FN+I+ +RL M + RPP+S+S+L +HM + +AVVVG+
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMS--NNQNSVAVVVGS 140
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 103 bits (248), Expect = 2e-21
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
GD +DVR+ +IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L++G++
Sbjct: 91 GDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRK 150
Query: 427 NAREAVRHFGPAPGAPRSHTKPYV--RTKDMKK 519
+ RE+VRHFG A G P SH+KPY R K+ K+
Sbjct: 151 SGRESVRHFG-ASGVPGSHSKPYATNRGKETKR 182
Score = 39.1 bits (87), Expect = 0.075
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKK 214
T++ FN++V +RL SR NR PIS+SR+A MK+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKR 73
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 100 bits (239), Expect = 3e-20
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+D RL +PK+ V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++G +
Sbjct: 300 GTVTDDARLLTVPKLNVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK 359
Query: 427 NAREAVRHFGPAPGAPRSHTKPYV 498
REA++HFG A G P SH KPYV
Sbjct: 360 -VREALKHFGRAAGLPGSHAKPYV 382
Score = 40.3 bits (90), Expect = 0.033
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTXEGLIAVVVGT 253
T+++FN VLRRL +R R PISVSRL + + + VVVGT
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGT 301
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 96.7 bits (230), Expect = 4e-19
Identities = 48/90 (53%), Positives = 62/90 (68%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G TND R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G
Sbjct: 83 GTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGAT 142
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
AREAV+HF + + KPYVR+K K
Sbjct: 143 KAREAVKHF---RNEVKGNPKPYVRSKGRK 169
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTXEGLIAVVVGT 253
T+ FN++VL+RL M R + P+S+S+L++HM+K AVVVGT
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEKRPDN--TAVVVGT 84
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 94.7 bits (225), Expect = 1e-18
Identities = 47/90 (52%), Positives = 59/90 (65%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DV + ++PK+ V AL VT +AR+ I+ GG+ LTFDQLAL +P TVL+ G R
Sbjct: 120 GTITDDVWVQEVPKLKVCALGVTSRARSHIVRVGGKNLTFDQLALDSPKVCSTVLLSGPR 179
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
RE HF A G P SHTKPYVR+K K
Sbjct: 180 KGREVYWHFDKALGTPHSHTKPYVRSKGRK 209
Score = 34.7 bits (76), Expect = 1.6
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 167 NRPPISVSRLARHMKKPTXEGLIAVVVGT 253
N+PP+S+SR+ MK P E AVVVGT
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGT 121
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 93.5 bits (222), Expect = 3e-18
Identities = 42/73 (57%), Positives = 56/73 (76%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+D R+++ PK TVAAL T ARA+I+ AGGE +T DQLA+RAP G+ T++++G R
Sbjct: 85 GTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPR 144
Query: 427 NAREAVRHFGPAP 465
N+REAVRHFG P
Sbjct: 145 NSREAVRHFGMGP 157
Score = 65.7 bits (153), Expect = 8e-10
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 GIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 178
GID K H R RT KS ++ T+A FN++VL+ LF+S+INRPP
Sbjct: 2 GIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPP 61
Query: 179 ISVSRLARHMKKPTXEGLIAVVVGT 253
+SVSR+AR +K+ VVVGT
Sbjct: 62 VSVSRIARALKQEGAANKTVVVVGT 86
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 90.6 bits (215), Expect = 2e-17
Identities = 45/86 (52%), Positives = 60/86 (69%)
Frame = +1
Query: 259 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 438
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 439 AVRHFGPAPGAPRSHTKPYVRTKDMK 516
AV+HF + + KPYVR+K K
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRK 207
Score = 42.7 bits (96), Expect = 0.006
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTXEGLIAVVVGTAQMT 265
T+ FN+IVL+RL M R + P+S+S+L++HM+ + AVV+GT T
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTST 88
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 90.2 bits (214), Expect = 3e-17
Identities = 48/84 (57%), Positives = 58/84 (69%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DVRL +PK+ V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R
Sbjct: 380 GTVTDDVRLLTVPKIKV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR 435
Query: 427 NAREAVRHFGPAPGAPRSHTKPYV 498
RE ++HFG A G P SH KPYV
Sbjct: 436 -VREELKHFGRAAGLPGSHAKPYV 458
Score = 40.3 bits (90), Expect = 0.033
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTXEGLIAVVVGT 253
T++ FN VLRRL +R R PISVSRL + + + VVVGT
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGT 381
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +1
Query: 256 TNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAR 435
T D R Y +PKM V AL T+ A A I AGG+ L FD+LAL+APTG+KTVL++G+RN R
Sbjct: 85 TYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRKTVLIRGKRNVR 143
Query: 436 EAVRHFG 456
EA++HFG
Sbjct: 144 EALKHFG 150
Score = 43.6 bits (98), Expect = 0.003
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = +2
Query: 5 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 184
ID++ H RK + + T +KF + +L RL +SR+NRP +S
Sbjct: 3 IDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPIVS 62
Query: 185 VSRLARHMKKPTXEGLIAV 241
S+LA MKK E + V
Sbjct: 63 TSKLACLMKKHPEETAVCV 81
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 81.8 bits (193), Expect = 1e-14
Identities = 37/67 (55%), Positives = 53/67 (79%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DVR++K+PK+ + AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG +
Sbjct: 54 GCITDDVRIHKLPKLKICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFK 113
Query: 427 NAREAVR 447
+ + R
Sbjct: 114 SETDMER 120
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTXEGLIAVVVG 250
TNAKFN IVL+RLFMSR N+ +S++R+ R M K EG AVVVG
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVG 54
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +1
Query: 256 TNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAR 435
TND RL IP+MT+ AL + AR+RI AGG ++FD+L PTG VL+QG+R+ R
Sbjct: 86 TNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEKPTGDNCVLLQGRRSCR 145
Query: 436 EAVRHFGPAPGAPRSHTKP 492
+ FG +PG P SH KP
Sbjct: 146 AVCKKFG-SPGRPNSHVKP 163
Score = 44.4 bits (100), Expect = 0.002
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 GIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 178
GID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 2 GIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPV 61
Query: 179 ISVSRLARHMKKPTXEGLIAVVVGT 253
+SVSRLA M K E IAVV T
Sbjct: 62 LSVSRLAHLMHK--REDKIAVVAST 84
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP+
Sbjct: 111 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPL 170
Query: 182 SVSRL 196
++SR+
Sbjct: 171 ALSRM 175
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+++R+ +PK+ V+AL VT AR+RIL A G+IL+FDQLA+ +P +G +
Sbjct: 72 GTVTDNIRIQDVPKLKVSALRVTSNARSRILKANGKILSFDQLAMTSP--------KGPQ 123
Query: 427 NAREAVRHFGPAPGAPRSHTKPYV 498
+ RH G G+P S+ KPYV
Sbjct: 124 KCYQGYRHLGKVSGSPHSYAKPYV 147
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 50.0 bits (114), Expect = 4e-05
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P+
Sbjct: 4 GLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPL 62
Query: 182 SVSRLARHMKKPTXEGLIAVVVGT 253
+SRL R M +G I VV+G+
Sbjct: 63 LLSRLVRFM--DGKKGKIVVVIGS 84
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 50.0 bits (114), Expect = 4e-05
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P+
Sbjct: 4 GLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPL 62
Query: 182 SVSRLARHMKKPTXEGLIAVVVGT 253
+SRL R M +G I VV+G+
Sbjct: 63 LLSRLVRFM--DGKKGKIVVVIGS 84
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +1
Query: 259 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 438
+D + IP + V AL ++ + +I GG I T DQL P LV + +R
Sbjct: 91 DDDEVMVIPAVKVVALQWSKGVKEKIERYGGTIGTLDQLFELCPNMDDICLVSTNKFSRR 150
Query: 439 AVRHFGPAPGAPRSHTKPYVRTK 507
+ + +GPAPG S T P K
Sbjct: 151 SAKFWGPAPGEKGSTTYPRANQK 173
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 37.1 bits (82), Expect = 0.30
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 286 KMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 414
K+ VAA+ ++ KA +++ AGGE+LT +L + P G +V
Sbjct: 79 KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRGSGVRIV 121
>UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 350
Score = 35.9 bits (79), Expect = 0.70
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 103 GQTYKCQIQSDRSTPALYEPYQPATNLCVSFGAPHEEANS*GFDCRGSGDSTNDVRLYKI 282
G ++CQ++ R +P++ +T+ CVS + S G T + +
Sbjct: 223 GMLHRCQVKRTRVSPSVLHKSPTSTSGCVSSSIQMDSTGSCGVSVGREQSITTQLLPSDV 282
Query: 283 PKMTVAALHVTEKARARILA 342
++ VAA + E+ RAR LA
Sbjct: 283 WEVCVAAKNAEEEVRARALA 302
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 35.5 bits (78), Expect = 0.93
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 259 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
ND R+ K PK+ + AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 111 NDERISKTPKLKIFALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 34.3 bits (75), Expect = 2.1
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Frame = +2
Query: 122 KFNQIVLRRLFMSRINRPPI--SVSRLARHMKKPTXE------GLIAVVVGTA 256
+F +++ L++S RP I SV LARHM KPT E G++ + GTA
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTA 1296
>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tethering factor SEC34 -
Strongylocentrotus purpuratus
Length = 781
Score = 33.5 bits (73), Expect = 3.7
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = -1
Query: 459 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 280
+A+ CL+ +LTL + + + +Q + K+ +S+S+NA T F+G +S+ ++
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256
Query: 279 LVQ 271
L++
Sbjct: 257 LME 259
>UniRef50_UPI00005A2BBE Cluster: PREDICTED: similar to Protection of
telomeres 1 (hPot1) (POT1-like telomere end-binding
protein); n=4; Mammalia|Rep: PREDICTED: similar to
Protection of telomeres 1 (hPot1) (POT1-like telomere
end-binding protein) - Canis familiaris
Length = 942
Score = 33.5 bits (73), Expect = 3.7
Identities = 21/45 (46%), Positives = 23/45 (51%)
Frame = +3
Query: 384 CSDWQEDSTGTRSAKCS*GSASLWPCSRSTALSH*TLCSHQGHEK 518
C QEDS T S+K S GS SL+ R LS L HQ EK
Sbjct: 609 CHSEQEDSLRTLSSKDSSGSVSLYEIERCQQLSATILTDHQYLEK 653
>UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG4917-PA, isoform A - Tribolium castaneum
Length = 838
Score = 33.1 bits (72), Expect = 4.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 356 FLLLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQ 466
FL + L ++++A RQ W +ML+ CVTL+ LQ
Sbjct: 455 FLYMFIPLLLVKIASRQDWKGTYQMLIPHCVTLSWLQ 491
>UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 1007
Score = 33.1 bits (72), Expect = 4.9
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -1
Query: 447 THCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYL-VQ 271
+HC + I LT Q CL S S L +F +SS F N + +R+ YL +
Sbjct: 598 SHCCSKIPLTTLQECLEKSSSYGEALTDLNSFPNSSTIHLAFIFKNFLNVNRYKYYLEIT 657
Query: 270 SHVICAVPTTTAIK 229
S+ P+ + +K
Sbjct: 658 SNDFQQFPSISLLK 671
>UniRef50_UPI000016262A Cluster: unknown protein; n=1; Arabidopsis
thaliana|Rep: unknown protein - Arabidopsis thaliana
Length = 839
Score = 32.7 bits (71), Expect = 6.5
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = -1
Query: 519 LFHVLGANIGFSVRA-RCSWSRAKVTHCLTSISLTLYQ-------YCLLASRSTKSQLIK 364
L HVL +++GFS+R C + + +C + S LY+ Y LL + ++
Sbjct: 458 LMHVLRSSMGFSIRVMTCRRWKDSLLYCGNNNSGELYEEHTDGEKYHLLVVVGSFGGVVM 517
Query: 363 SKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHV---ICAVPTTTAIKPSXVGFFMW 202
S NM+SS H+ +++ HV + PTT+ + S F W
Sbjct: 518 IGGLSKVHILHHHQVLVNMESSMVHVIFVLLHHVFWMVLVFPTTSISRESRASFICW 574
>UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 598
Score = 32.7 bits (71), Expect = 6.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 465 WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQ 337
W K T +I+LT Q+CLL R+T + NF+ SS+
Sbjct: 73 WKYFKYTMAPYTIALTPEQHCLLGLRNTGEHFCSTSNFARSSK 115
>UniRef50_Q9S9L5 Cluster: F26C17.6 protein; n=1; Arabidopsis
thaliana|Rep: F26C17.6 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 622
Score = 32.7 bits (71), Expect = 6.5
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = -1
Query: 519 LFHVLGANIGFSVRA-RCSWSRAKVTHCLTSISLTLYQ-------YCLLASRSTKSQLIK 364
L HVL +++GFS+R C + + +C + S LY+ Y LL + ++
Sbjct: 207 LMHVLRSSMGFSIRVMTCRRWKDSLLYCGNNNSGELYEEHTDGEKYHLLVVVGSFGGVVM 266
Query: 363 SKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHV---ICAVPTTTAIKPSXVGFFMW 202
S NM+SS H+ +++ HV + PTT+ + S F W
Sbjct: 267 IGGLSKVHILHHHQVLVNMESSMVHVIFVLLHHVFWMVLVFPTTSISRESRASFICW 323
>UniRef50_Q6QQB2 Cluster: Vitellogenin; n=4; Metapenaeus ensis|Rep:
Vitellogenin - Metapenaeus ensis (Greasyback shrimp)
(Sand shrimp)
Length = 2560
Score = 32.7 bits (71), Expect = 6.5
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +1
Query: 307 HVTEKA----RARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAP 474
H+TE R ++ G EILTFD L +RAP VL+ + R + H A P
Sbjct: 2317 HITELLPPYPRTAMVVGGTEILTFDGLVVRAPRSPCKVLLAAHGSHRLIMSH-PEATARP 2375
Query: 475 RSHTKPYVRTKDMKKQGPVVV 537
K T ++K V V
Sbjct: 2376 ELELKTPQATVEIKSDLQVFV 2396
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 32.7 bits (71), Expect = 6.5
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 286 KMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 414
K+T+ ++ A ++L++GG + F +L PTGK VL+
Sbjct: 83 KITLCPFGISGAAAEKVLSSGGRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 32.3 bits (70), Expect = 8.6
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -1
Query: 375 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQ 271
+L KS +F +S+N T+ FGNMK S ++ + V+
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVE 254
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 32.3 bits (70), Expect = 8.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 199 RQTRHRDWWPVDTAHKEP 146
RQ+ DWWP D HKEP
Sbjct: 179 RQSTKPDWWPSDVPHKEP 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,687,598
Number of Sequences: 1657284
Number of extensions: 12664304
Number of successful extensions: 35312
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 34050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35278
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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