Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30149
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 119 9e-27
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 119 9e-27
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 119 9e-27
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 119 9e-27
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 119 9e-27
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 119 9e-27
BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein. 30 5.3
AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 30 5.3
AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 30 5.3
AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+... 30 5.3
AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein. 30 5.3
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 119 bits (286), Expect = 9e-27
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
RE RHFG APG P SHTKPYVR+K K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 93.9 bits (223), Expect = 4e-19
Identities = 47/84 (55%), Positives = 54/84 (64%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTXEGLIAVVVGT 253
S+SR+ R MK P E AVVVGT
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGT 85
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 119 bits (286), Expect = 9e-27
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R
Sbjct: 61 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 120
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
RE RHFG APG P SHTKPYVR+K K
Sbjct: 121 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 150
Score = 66.9 bits (156), Expect = 5e-11
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTXEGLIAVVVGT 253
TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P E AVVVGT
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGT 62
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 119 bits (286), Expect = 9e-27
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
RE RHFG APG P SHTKPYVR+K K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 91.9 bits (218), Expect = 2e-18
Identities = 46/84 (54%), Positives = 53/84 (63%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTXEGLIAVVVGT 253
+SR+ R MK P E AVVVGT
Sbjct: 62 CLSRMIRKMKLPGRENKTAVVVGT 85
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 119 bits (286), Expect = 9e-27
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
RE RHFG APG P SHTKPYVR+K K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 93.9 bits (223), Expect = 4e-19
Identities = 47/84 (55%), Positives = 54/84 (64%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTXEGLIAVVVGT 253
S+SR+ R MK P E AVVVGT
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGT 85
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 119 bits (286), Expect = 9e-27
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
RE RHFG APG P SHTKPYVR+K K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 93.9 bits (223), Expect = 4e-19
Identities = 47/84 (55%), Positives = 54/84 (64%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTXEGLIAVVVGT 253
S+SR+ R MK P E AVVVGT
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGT 85
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 119 bits (286), Expect = 9e-27
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 426
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143
Query: 427 NAREAVRHFGPAPGAPRSHTKPYVRTKDMK 516
RE RHFG APG P SHTKPYVR+K K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 93.9 bits (223), Expect = 4e-19
Identities = 47/84 (55%), Positives = 54/84 (64%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTXEGLIAVVVGT 253
S+SR+ R MK P E AVVVGT
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGT 85
>BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein.
Length = 1069
Score = 30.3 bits (65), Expect = 5.3
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 241 GSGDSTNDVRLYKIPKM---TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL 411
GS ++T + + IP M T + T K AAG E D PT +T+
Sbjct: 98 GSDEATLSMTVENIPSMPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLT 152
Query: 412 VQGQRNAREAVRHFGPAP-GAPRSHTKPYVRTK 507
++R+ V+ + P P G +S++ VR K
Sbjct: 153 YYTSTSSRQIVKKYTPTPRGEMKSYSPTQVREK 185
>AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger protein.
Length = 1099
Score = 30.3 bits (65), Expect = 5.3
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 241 GSGDSTNDVRLYKIPKM---TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL 411
GS ++T + + IP M T + T K AAG E D PT +T+
Sbjct: 98 GSDEATLSMTVENIPSMPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLT 152
Query: 412 VQGQRNAREAVRHFGPAP-GAPRSHTKPYVRTK 507
++R+ V+ + P P G +S++ VR K
Sbjct: 153 YYTSTSSRQIVKKYTPTPRGEMKSYSPTQVREK 185
>AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger splice variant protein.
Length = 1099
Score = 30.3 bits (65), Expect = 5.3
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 241 GSGDSTNDVRLYKIPKM---TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL 411
GS ++T + + IP M T + T K AAG E D PT +T+
Sbjct: 98 GSDEATLSMTVENIPSMPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLT 152
Query: 412 VQGQRNAREAVRHFGPAP-GAPRSHTKPYVRTK 507
++R+ V+ + P P G +S++ VR K
Sbjct: 153 YYTSTSSRQIVKKYTPTPRGEMKSYSPTQVREK 185
>AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+
exchanger protein.
Length = 1081
Score = 30.3 bits (65), Expect = 5.3
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 241 GSGDSTNDVRLYKIPKM---TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL 411
GS ++T + + IP M T + T K AAG E D PT +T+
Sbjct: 98 GSDEATLSMTVENIPSMPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLT 152
Query: 412 VQGQRNAREAVRHFGPAP-GAPRSHTKPYVRTK 507
++R+ V+ + P P G +S++ VR K
Sbjct: 153 YYTSTSSRQIVKKYTPTPRGEMKSYSPTQVREK 185
>AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein.
Length = 988
Score = 30.3 bits (65), Expect = 5.3
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 241 GSGDSTNDVRLYKIPKM---TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL 411
GS ++T + + IP M T + T K AAG E D PT +T+
Sbjct: 101 GSDEATLSMTVENIPSMPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLT 155
Query: 412 VQGQRNAREAVRHFGPAP-GAPRSHTKPYVRTK 507
++R+ V+ + P P G +S++ VR K
Sbjct: 156 YYTSTSSRQIVKKYTPTPRGEMKSYSPTQVREK 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,500,264
Number of Sequences: 237096
Number of extensions: 2086391
Number of successful extensions: 4463
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4462
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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