Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30145
(462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 165 2e-41
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 165 2e-41
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 137 3e-33
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 136 7e-33
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 136 7e-33
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 87 4e-18
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 76 1e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 60 6e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 60 6e-10
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 57 7e-09
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 44 5e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 41 5e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 40 0.001
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 40 0.001
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 40 0.001
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.100
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 32 0.23
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 30 0.70
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.2
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 29 2.1
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 4.9
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 4.9
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 4.9
Z54238-2|CAA90994.1| 200|Caenorhabditis elegans Hypothetical pr... 27 6.5
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 27 6.5
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 165 bits (400), Expect = 2e-41
Identities = 80/85 (94%), Positives = 81/85 (95%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Query: 182 LRLRGGTIEPSLRILAMKYNCEKMI 256
LRLRGG IEPSLR LA KYNC+K I
Sbjct: 71 LRLRGGIIEPSLRQLAQKYNCDKQI 95
Score = 54.8 bits (126), Expect = 3e-08
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +1
Query: 256 CRKCYARLHPRATNCRKTKCGHTNNLR 336
CRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 96 CRKCYARLPPRASNCRKKKCGHSSELR 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 165 bits (400), Expect = 2e-41
Identities = 80/85 (94%), Positives = 81/85 (95%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Query: 182 LRLRGGTIEPSLRILAMKYNCEKMI 256
LRLRGG IEPSLR LA KYNC+K I
Sbjct: 71 LRLRGGIIEPSLRQLAQKYNCDKQI 95
Score = 54.8 bits (126), Expect = 3e-08
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +1
Query: 256 CRKCYARLHPRATNCRKTKCGHTNNLR 336
CRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 96 CRKCYARLPPRASNCRKKKCGHSSELR 122
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 137 bits (332), Expect = 3e-33
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 771 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
Query: 182 LRLRGGTI 205
LRLRGG I
Sbjct: 831 LRLRGGDI 838
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 375 LRLRGG 380
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 391 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 451 LRLRGG 456
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 527 LRLRGG 532
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 543 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 603 LRLRGG 608
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 679 LRLRGG 684
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 695 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 755 LRLRGG 760
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 375 LRLRGG 380
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 391 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 451 LRLRGG 456
Score = 77.8 bits (183), Expect = 4e-15
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 112
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 375 LRLRGG 380
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 391 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 451 LRLRGG 456
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 527 LRLRGG 532
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 543 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 603 LRLRGG 608
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 679 LRLRGG 684
Score = 136 bits (329), Expect = 7e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 695 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 755 LRLRGG 760
Score = 136 bits (329), Expect = 7e-33
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 771 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
Query: 182 LRLRGGTI 205
LRLRGG I
Sbjct: 831 LRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 87.4 bits (207), Expect = 4e-18
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
K I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 11 KEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
Query: 182 LRLRGG 199
L LRGG
Sbjct: 71 LALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 75.8 bits (178), Expect = 1e-14
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 171 KTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Query: 182 LRLR 193
R R
Sbjct: 231 SRHR 234
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
+ VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL L
Sbjct: 103 ITVEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRL 153
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 60.5 bits (140), Expect = 6e-10
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
+T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E+T+++
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVN 64
Query: 182 LRLRGG 199
L L GG
Sbjct: 65 LELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 60.5 bits (140), Expect = 6e-10
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
+T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E+T+++
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVN 64
Query: 182 LRLRGG 199
L L GG
Sbjct: 65 LELLGG 70
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 56.8 bits (131), Expect = 7e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIP 82
KTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 17 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
++ DT+ ++K I+ + IP L F+GK+LED ++ DYNIQK ST+ + R
Sbjct: 168 KIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLSDYNIQKESTL 172
+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL D + + STL
Sbjct: 112 RTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTL 171
Query: 173 HL 178
L
Sbjct: 172 RL 173
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/55 (43%), Positives = 29/55 (52%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
L V SDTI VK I + R++ K LED TL+ YNIQ+ STL L
Sbjct: 187 LWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 40.7 bits (91), Expect = 5e-04
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KT TL V ASDT+E K ++ R+ + GK L D T +YNI ST+ L
Sbjct: 52 KTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNISNNSTMDLH 107
Query: 182 LRL 190
R+
Sbjct: 108 FRI 110
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 193
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/64 (25%), Positives = 38/64 (59%)
Frame = +2
Query: 8 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+ ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L ++
Sbjct: 589 VQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVK 648
Query: 188 LRGG 199
RGG
Sbjct: 649 ERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/64 (25%), Positives = 38/64 (59%)
Frame = +2
Query: 8 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+ ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L ++
Sbjct: 589 VQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVK 648
Query: 188 LRGG 199
RGG
Sbjct: 649 ERGG 652
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/38 (42%), Positives = 28/38 (73%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 115
+T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 172
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.1 bits (72), Expect = 0.100
Identities = 13/60 (21%), Positives = 31/60 (51%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
+ +TL + + IE++ ++ IP D+ ++F GK+L + D ++ + + L+
Sbjct: 18 RNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPATQIMLL 77
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 31.9 bits (69), Expect = 0.23
Identities = 17/52 (32%), Positives = 33/52 (63%)
Frame = +2
Query: 32 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 187
+++E +K KI+ + GIP + L GK L D + L+DY + ++++ L++R
Sbjct: 163 ESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTSVELLVR 212
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 8 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 172
I +E+++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 194 IPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 256 CRKCYARLHPRATNCRKTKCGHT 324
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 190
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYLKKKK 159
Query: 191 RGGTI 205
+ T+
Sbjct: 160 KLSTL 164
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 71 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 223
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1514
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 71 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 223
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 71 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 223
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>Z54238-2|CAA90994.1| 200|Caenorhabditis elegans Hypothetical
protein T28C6.3 protein.
Length = 200
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 289 HEDEDGHSIYGNHFLTVILHGENAKGRFNCT-SSKSQNQVKCGFFLDVIV 143
+EDE+G SI LT+ + N+K N T +S+S N + C L + +
Sbjct: 135 YEDEEGKSIIEKEALTISPNSCNSKHTRNVTKTSQSFNVLVCILVLGLYI 184
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 113 KQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 235
K ++D R L DY+ K ++L L +I+P LR L +K
Sbjct: 1173 KMIDDIRGLLDYDTAKIGQINLALYHFSDSIQPVLRRLDIK 1213
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 100
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,267,973
Number of Sequences: 27780
Number of extensions: 211201
Number of successful extensions: 556
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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