Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30145
(462 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 157 3e-39
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 157 3e-39
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 135 2e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 135 2e-32
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 133 6e-32
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 133 6e-32
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 133 6e-32
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 132 8e-32
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 132 8e-32
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 132 8e-32
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 132 8e-32
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 132 8e-32
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 132 8e-32
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 132 8e-32
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 132 8e-32
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 132 8e-32
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 132 8e-32
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 132 8e-32
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 132 8e-32
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 132 8e-32
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 131 2e-31
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 131 3e-31
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 120 4e-28
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 99 7e-22
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 84 5e-17
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 59 1e-09
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 57 7e-09
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 55 3e-08
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 50 6e-07
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 50 6e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 49 2e-06
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 48 3e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 45 2e-05
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 45 2e-05
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 44 5e-05
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 43 1e-04
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 42 2e-04
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 42 3e-04
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 40 6e-04
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 40 8e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.001
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 38 0.003
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 37 0.006
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.010
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 36 0.010
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 36 0.018
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 36 0.018
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 36 0.018
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 35 0.023
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 35 0.031
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 35 0.031
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 34 0.041
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 34 0.041
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 32 0.22
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 31 0.50
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 30 0.66
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 30 0.66
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.66
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 29 2.0
At1g47680.1 68414.m05297 hypothetical protein 29 2.0
At3g54530.1 68416.m06034 hypothetical protein 28 3.5
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 27 4.7
At2g19180.1 68415.m02238 expressed protein 27 4.7
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 27 4.7
At1g14560.1 68414.m01731 mitochondrial substrate carrier family ... 27 8.2
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 27 8.2
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 157 bits (381), Expect = 3e-39
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGGTIEPSLRILAMKYNCEKMI 256
LRLRGG IEPSL +LA KYN +KMI
Sbjct: 71 LRLRGGIIEPSLMMLARKYNQDKMI 95
Score = 63.3 bits (147), Expect = 8e-11
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 256 CRKCYARLHPRATNCRKTKCGHTNNLRP 339
CRKCYARLHPRA NCRK KCGH+N LRP
Sbjct: 96 CRKCYARLHPRAVNCRKKKCGHSNQLRP 123
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 157 bits (381), Expect = 3e-39
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGGTIEPSLRILAMKYNCEKMI 256
LRLRGG IEPSL +LA KYN +KMI
Sbjct: 71 LRLRGGIIEPSLMMLARKYNQDKMI 95
Score = 63.3 bits (147), Expect = 8e-11
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 256 CRKCYARLHPRATNCRKTKCGHTNNLRP 339
CRKCYARLHPRA NCRK KCGH+N LRP
Sbjct: 96 CRKCYARLHPRAVNCRKKKCGHSNQLRP 123
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 135 bits (326), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGGTI 205
LRLRGGT+
Sbjct: 71 LRLRGGTM 78
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/68 (55%), Positives = 52/68 (76%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
K I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLV
Sbjct: 87 KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLV 146
Query: 182 LRLRGGTI 205
L LRGG +
Sbjct: 147 LALRGGLL 154
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 135 bits (326), Expect = 2e-32
Identities = 64/68 (94%), Positives = 68/68 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGGTI 205
LRLRGGT+
Sbjct: 71 LRLRGGTM 78
Score = 89.4 bits (212), Expect = 1e-18
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
K I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV
Sbjct: 87 KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 146
Query: 182 LRLRGG 199
L LRGG
Sbjct: 147 LALRGG 152
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 133 bits (321), Expect = 6e-32
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Query: 182 LRLRGGT 202
LRLRGG+
Sbjct: 375 LRLRGGS 381
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 133 bits (321), Expect = 6e-32
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 182 LRLRGGT 202
LRLRGG+
Sbjct: 299 LRLRGGS 305
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 133 bits (321), Expect = 6e-32
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 182 LRLRGGT 202
LRLRGG+
Sbjct: 299 LRLRGGS 305
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 47.6 bits (108), Expect = 4e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKE 73
KTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKE 262
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 75 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 179
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 263 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 375 LRLRGG 380
Score = 47.6 bits (108), Expect = 4e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKE 73
KTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 75 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 179
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 47.6 bits (108), Expect = 4e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKE 73
KTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 75 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 179
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 375 LRLRGG 380
Score = 47.6 bits (108), Expect = 4e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKE 73
KTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 75 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 179
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 47.6 bits (108), Expect = 4e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKE 73
KTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 75 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 179
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 299 LRLRGG 304
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
Score = 129 bits (312), Expect = 8e-31
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 162 KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 221
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 222 LRLRGG 227
Score = 125 bits (302), Expect = 1e-29
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D NIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLV 145
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 146 LRLRGG 151
Score = 82.2 bits (194), Expect = 2e-16
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 130
KTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 238 KTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 132 bits (320), Expect = 8e-32
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 71 LRLRGG 76
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 131 bits (317), Expect = 2e-31
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 147 LRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLV 222
Query: 182 LRLRGGT 202
LRLRGG+
Sbjct: 223 LRLRGGS 229
Score = 116 bits (280), Expect = 6e-27
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN+Q++STLHL+
Sbjct: 11 KTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLL 70
Query: 182 LRLRGG 199
LR RGG
Sbjct: 71 LRFRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 131 bits (316), Expect = 3e-31
Identities = 61/66 (92%), Positives = 66/66 (100%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLV
Sbjct: 89 KTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLV 148
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 149 LRLRGG 154
Score = 125 bits (302), Expect = 1e-29
Identities = 60/66 (90%), Positives = 63/66 (95%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 165 KTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 224
Query: 182 LRLRGG 199
LRL GG
Sbjct: 225 LRLCGG 230
Score = 117 bits (282), Expect = 3e-27
Identities = 59/67 (88%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHL 178
KTITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DYNIQKESTLHL
Sbjct: 241 KTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHL 300
Query: 179 VLRLRGG 199
VLRLRGG
Sbjct: 301 VLRLRGG 307
Score = 107 bits (257), Expect = 4e-24
Identities = 51/66 (77%), Positives = 59/66 (89%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+IQK+S LHL
Sbjct: 13 KTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLA 72
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 73 LRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 120 bits (290), Expect = 4e-28
Identities = 59/66 (89%), Positives = 63/66 (95%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEV++SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 89 KTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 148
Query: 182 LRLRGG 199
LRL GG
Sbjct: 149 LRLCGG 154
Score = 120 bits (288), Expect = 6e-28
Identities = 58/66 (87%), Positives = 62/66 (93%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYNIQKESTLHLV
Sbjct: 13 KTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLV 72
Query: 182 LRLRGG 199
LRLRGG
Sbjct: 73 LRLRGG 78
Score = 97.5 bits (232), Expect = 4e-21
Identities = 49/64 (76%), Positives = 54/64 (84%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+I K+STL+LV
Sbjct: 562 KTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLV 621
Query: 182 LRLR 193
LRLR
Sbjct: 622 LRLR 625
Score = 95.9 bits (228), Expect = 1e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
K ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL
Sbjct: 403 KIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLF 462
Query: 182 LRLRGG 199
+R G
Sbjct: 463 FHIRHG 468
Score = 92.7 bits (220), Expect = 1e-19
Identities = 46/66 (69%), Positives = 55/66 (83%), Gaps = 2/66 (3%)
Frame = +2
Query: 5 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDGRTLSDYNIQKESTLHL 178
T+TL+VE+SDTIENVKAKIQD+EG+ PD QRLIF G++L ED RTL+DY I+ STL L
Sbjct: 171 TLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCL 230
Query: 179 VLRLRG 196
LRLRG
Sbjct: 231 ALRLRG 236
Score = 92.3 bits (219), Expect = 1e-19
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 193
LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R
Sbjct: 257 LEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFR 316
Query: 194 GG 199
G
Sbjct: 317 CG 318
Score = 91.1 bits (216), Expect = 3e-19
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+ L RTL DYNIQK ST+H +
Sbjct: 486 KTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQL 545
Query: 182 LRLRGG 199
RGG
Sbjct: 546 FLQRGG 551
Score = 90.6 bits (215), Expect = 4e-19
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 2/66 (3%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSDYNIQKESTLH 175
K I LEVE+ DTIENVKA +QDKEGI P QRLIF GK+L+DG TL+DY+IQKESTLH
Sbjct: 329 KRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLH 388
Query: 176 LVLRLR 193
LVL ++
Sbjct: 389 LVLGMQ 394
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 99 bits (238), Expect = 7e-22
Identities = 47/63 (74%), Positives = 53/63 (84%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYNIQ +S LHL+
Sbjct: 96 RRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLI 155
Query: 182 LRL 190
RL
Sbjct: 156 KRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 83.8 bits (198), Expect = 5e-17
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLV
Sbjct: 11 KQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLV 70
Query: 182 LRLRGG 199
L LRGG
Sbjct: 71 LALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 59.3 bits (137), Expect = 1e-09
Identities = 26/62 (41%), Positives = 41/62 (66%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
+T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+++ TLHL+
Sbjct: 34 RTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLI 93
Query: 182 LR 187
+R
Sbjct: 94 VR 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 56.8 bits (131), Expect = 7e-09
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 172
KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SDYNI+ ++ L
Sbjct: 151 KTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 52.0 bits (119), Expect = 2e-07
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 13/76 (17%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLS 142
+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+ ++ D
Sbjct: 60 RTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTI 119
Query: 143 DYNIQKESTLHLVLRL 190
D I E T LVLRL
Sbjct: 120 DLKINGEPTRQLVLRL 135
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/64 (39%), Positives = 44/64 (68%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+++++L LV
Sbjct: 106 KTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLV 165
Query: 182 LRLR 193
R++
Sbjct: 166 ARMQ 169
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 50.4 bits (115), Expect = 6e-07
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 8 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 184
I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + + LHLVL
Sbjct: 46 IPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVL 105
Query: 185 RLRGGTIEPSLRILAMKYNCEK 250
+L L++L +K C K
Sbjct: 106 KL------SDLQVLDVKTTCGK 121
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 175
K VE I VK +I K G + PD+Q +++ G++LED ++D +S LH
Sbjct: 121 KHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLH 180
Query: 176 LVLR 187
L++R
Sbjct: 181 LLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 50.4 bits (115), Expect = 6e-07
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 8 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 184
I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + + LHLVL
Sbjct: 46 IPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVL 105
Query: 185 RLRGGTIEPSLRILAMKYNCEK 250
+L L++L +K C K
Sbjct: 106 KL------SDLQVLDVKTTCGK 121
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 175
K VE I VK +I K G + PD+Q +++ G++LED ++D +S LH
Sbjct: 121 KHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLH 180
Query: 176 LVLR 187
L++R
Sbjct: 181 LLVR 184
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/57 (33%), Positives = 35/57 (61%)
Frame = +2
Query: 11 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
+++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 31 SVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 35 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 39 TVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 45.2 bits (102), Expect = 2e-05
Identities = 18/59 (30%), Positives = 39/59 (66%)
Frame = +2
Query: 8 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS ++ + L +++
Sbjct: 13 ITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGVKDDDLLMMMV 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 5 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLV 181
T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S LHLV
Sbjct: 45 TMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLV 104
Query: 182 LRL 190
L+L
Sbjct: 105 LKL 107
Score = 30.7 bits (66), Expect = 0.50
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLH 175
K V+ + +K +I ++ +G P D Q ++F G++L+D R + S +H
Sbjct: 121 KVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIH 180
Query: 176 LVLR 187
L+++
Sbjct: 181 LLVK 184
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +2
Query: 5 TITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY++++ TL+LV
Sbjct: 22 THTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLSDYNIQKESTL 172
K +EVE + TI ++K KI D G+ Q L GK ++ G T+ DY I+
Sbjct: 11 KKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDYKIKACDIF 70
Query: 173 HLVLRLRGG 199
H+ R+RGG
Sbjct: 71 HMSDRMRGG 79
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 41 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 199
E +K +I ++ IP QRLI G Q+ DG +S Q ++T++LVL LRGG
Sbjct: 33 EQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----QPDATVNLVLSLRGG 81
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 5 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
T ++++ DT+ K KI+ + IP +Q + F GK LED + +++I + LHL
Sbjct: 12 TFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 40.3 bits (90), Expect = 6e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 5 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
+ ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY I ES L L
Sbjct: 12 SFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRLLL 69
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 39.9 bits (89), Expect = 8e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 5 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 172
+ ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY I ES L
Sbjct: 12 SFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 8 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKESTLHLVL 184
I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY + LHLV+
Sbjct: 44 IPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGKLLHLVI 103
Query: 185 RL 190
RL
Sbjct: 104 RL 105
Score = 35.1 bits (77), Expect = 0.023
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 KTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 172
K L VE S + VK +I KE GIP D + L G++L+D R ++D ++ +
Sbjct: 119 KEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDLCQNGDNVI 177
Query: 173 HLVL 184
HL++
Sbjct: 178 HLLI 181
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 37.9 bits (84), Expect = 0.003
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 KTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
K++TL + E +K +I ++ IP QRLI G Q+ +S Q ++T++L
Sbjct: 19 KSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS----QSDTTMNL 74
Query: 179 VLRLRGGT--IEPSLRILAMKYNCEK 250
VL LRGG + LR + MK +K
Sbjct: 75 VLSLRGGKGGLGSLLRNVVMKAGQKK 100
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
L V +++ ++KAK K + ++ + GK+LED ++L++ N+Q S +HL+
Sbjct: 514 LTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQPNSLVHLL 570
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.010
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 127
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 36.3 bits (80), Expect = 0.010
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 29 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 199
S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 35.5 bits (78), Expect = 0.018
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
+ V SDTI VK I+D +G P QQ LI GK L+D +L + + +E L ++L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 35.5 bits (78), Expect = 0.018
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
+ V SDTI VK I+D +G P QQ LI GK L+D +L + + +E L ++L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 35.5 bits (78), Expect = 0.018
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 184
+ V SDTI VK I+D +G P QQ LI GK L+D +L + + +E L ++L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML 74
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 35.1 bits (77), Expect = 0.023
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +2
Query: 14 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHL 178
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSK--- 70
Query: 179 VLRLRGGTIEPSLRILAMKYNCEKMIAVNA 268
+L R E I+A + ++ V A
Sbjct: 71 ILSCRQAAPEEGKSIMAEEERARRLSRVKA 100
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 34.7 bits (76), Expect = 0.031
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 5 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
+ T++V DT+ +K KI+ +G P +Q LIF K L+D + I+ S + L
Sbjct: 13 SFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 34.7 bits (76), Expect = 0.031
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 5 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
+ T++V DT+ +K KI+ +G P +Q LIF K L+D + I+ S + L
Sbjct: 47 SFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRILL 104
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 34.3 bits (75), Expect = 0.041
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 5 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
T +E+ DT+ +K KI+ + IP +Q L+F G L+D + I S + L
Sbjct: 12 TFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVILNHSRIQL 69
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 34.3 bits (75), Expect = 0.041
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 181
L V +++ +++AK K + ++ + GK+L+D ++L+ N+Q S +HL+
Sbjct: 675 LHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 31.9 bits (69), Expect = 0.22
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 127
+ ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 93 ISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 30.7 bits (66), Expect = 0.50
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Frame = +2
Query: 26 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 205
A+ ++E VK IQD + P++ L+ + L GR L + + +H+V R I
Sbjct: 50 AASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEI 106
Query: 206 E--------------PSLRILAMKYNCEKMIAVNAMPVFILVLPTVARQSADTLTI 331
P ++++ Y CEK+ VN M F ++L R+SA L I
Sbjct: 107 AGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEM-YFSIILD---RKSAGPLII 158
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 30.3 bits (65), Expect = 0.66
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 112
+EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 15 IEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 30.3 bits (65), Expect = 0.66
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 127
+E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 15 IELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.66
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +2
Query: 29 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 169
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 170 LHLVLRL 190
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 14 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 112
LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 15 LEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 23 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At3g54530.1 68416.m06034 hypothetical protein
Length = 273
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -2
Query: 320 CPHFVLRQLVARG*RRA*HLRQSFSHSYTSWRECEGKVQLYLL*VSKPG 174
CP R A +R L Q + H+Y + E + +Y + +PG
Sbjct: 43 CPGSFGRSSFAEAKKRLEKLEQDYQHTYEKYTELQSDRYMYYIAFQRPG 91
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 106 KDETLLVWRNTFLVLDFSFDIFDSVGSFHLQ 14
+DE W LVLDF++D+ D + ++HL+
Sbjct: 54 EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82
>At2g19180.1 68415.m02238 expressed protein
Length = 179
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 388 YNKFPIWLLFNP*SSFWV 335
+N P WL F P SSFWV
Sbjct: 73 HNSTPDWLPFAPGSSFWV 90
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 106 CRETIRRWPHSFRL*HPERIHTSPGFE 186
C+ETI+ W H+ + + H PG E
Sbjct: 447 CKETIQEWHHAINVLNSPAGHKFPGME 473
>At1g14560.1 68414.m01731 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 331
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -1
Query: 420 VSFACYENSIVTINFPFGYYLILDLLFGSQIVSVSALCLATVGSTRMK 277
+++ Y + I+ N P G I+DL+ GS + LC + R K
Sbjct: 99 MTYEVYRDWILEKNLPLGSGPIVDLVAGSAAGGTAVLCTYPLDLARTK 146
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 26.6 bits (56), Expect = 8.2
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +2
Query: 2 KTITLEVEASD---TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 172
KTI ++ E + T+E+ AK + EG + I + DG D+ +Q+ S+
Sbjct: 100 KTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSF 159
Query: 173 HLVLRLRGGTIEPSLRILAMKYNCEKMIA 259
+V GG + R M +K A
Sbjct: 160 QMVEGSMGGGVTRGKRGRVMMEAMDKAAA 188
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,656,819
Number of Sequences: 28952
Number of extensions: 195528
Number of successful extensions: 637
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 772134480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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