Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30144
         (498 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical...    29   1.9  
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     28   3.3  
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ...    28   3.3  
AF016450-2|AAB65983.1|  545|Caenorhabditis elegans Hypothetical ...    28   3.3  
Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protei...    27   7.6  
AL132863-3|CAB60570.1|  412|Caenorhabditis elegans Hypothetical ...    27   7.6  
AF047655-9|AAC04395.1|  313|Caenorhabditis elegans Hypothetical ...    27   7.6  

>AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical
           protein Y47D3A.28 protein.
          Length = 691

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 42  HLTETQ-KEKAKQYTSECVKESGVSTEVINAAK-TGQYSEDKAFKK 173
           HLT  + +EK + +T+ CV+   V     N  K T Q++  +  KK
Sbjct: 574 HLTGMEEREKVETFTTTCVEVKNVKVVTCNQCKYTSQFASSECIKK 619


>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 21   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 194
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 836  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895

Query: 195  K 197
            +
Sbjct: 896  Q 896


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 21   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 194
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 836  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895

Query: 195  K 197
            +
Sbjct: 896  Q 896


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 21   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 194
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 836  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895

Query: 195  K 197
            +
Sbjct: 896  Q 896


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 21   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 194
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 836  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895

Query: 195  K 197
            +
Sbjct: 896  Q 896


>U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical
           protein F57F4.2 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 182 KHEFLKSFIFGVLSSLRCIYHF 117
           K+EFLKS I   L +L C+ HF
Sbjct: 231 KNEFLKSHIHSKLRNLMCMLHF 252


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 21   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 194
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 860  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 919

Query: 195  K 197
            +
Sbjct: 920  Q 920


>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
           protein Y11D7A.14 protein.
          Length = 1464

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 87  ECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAIL 209
           +CV  SGV  E +  A+T   S    F KF+   F++++ L
Sbjct: 203 DCVVTSGVLLEAMGNARTTHNSNSSRFGKFIRIEFDENSKL 243


>AF016450-2|AAB65983.1|  545|Caenorhabditis elegans Hypothetical
           protein B0238.1 protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 262 VNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYY 360
           V K   ++ LE  +DK+G+    K  EIF  YY
Sbjct: 367 VVKKAVEAYLENIEDKSGEKIGKKLVEIFGDYY 399


>Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical
           protein F23B12.7 protein.
          Length = 953

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 262 VNKSEAQSVLEQCKDKTGQDAA 327
           +N SE Q +LE+ KD+  QDAA
Sbjct: 118 MNASEIQKLLEEGKDEMAQDAA 139


>Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical
           protein F14E5.2b protein.
          Length = 1147

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = -2

Query: 347 KISKALSAASCPVLSLHCSSTLWASDLLTPGEV 249
           K+++ALS A  PV+S HC+   +A++ +  G+V
Sbjct: 634 KLNRALSKACKPVISTHCAQ--FANEEIDHGDV 664


>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical
           protein F14E5.2a protein.
          Length = 1149

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = -2

Query: 347 KISKALSAASCPVLSLHCSSTLWASDLLTPGEV 249
           K+++ALS A  PV+S HC+   +A++ +  G+V
Sbjct: 634 KLNRALSKACKPVISTHCAQ--FANEEIDHGDV 664


>U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protein
           protein 64 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 262 HQEKFSSATSMFSVPSEFKIADLLKKQST 176
           H E+F   T +FSV +  K+ D L K+S+
Sbjct: 224 HFEEFGCGTDVFSVSNAVKVRDDLMKRSS 252


>AL132863-3|CAB60570.1|  412|Caenorhabditis elegans Hypothetical
           protein Y37H2A.5 protein.
          Length = 412

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = -3

Query: 262 HQEKFSSATSMFSVPSEFKIADLLKKQSTNFLKALSSEYCPVFAAFITSVLTP--DSLTH 89
           H  +FS     FSV    KI D+L K S +F     + Y   F   +  V  P  D L+ 
Sbjct: 326 HLSQFSVKLESFSVDDAIKIRDILLK-SPSFQSGKFTSYSSNFQEML-KVFVPRFDGLSG 383

Query: 88  SEVY 77
           S VY
Sbjct: 384 SLVY 387


>AF047655-9|AAC04395.1|  313|Caenorhabditis elegans Hypothetical
           protein C17B7.11 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 262 HQEKFSSATSMFSVPSEFKIADLLKKQST 176
           H E+F   T +FSV +  K+ D L K+S+
Sbjct: 224 HFEEFGCRTDVFSVENAIKVRDDLMKRSS 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,421,769
Number of Sequences: 27780
Number of extensions: 196799
Number of successful extensions: 506
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)