Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30142
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118902-1|AAM50762.1|  665|Drosophila melanogaster LD11581p pro...    30   2.7  
AE014298-2935|AAF49018.2|  665|Drosophila melanogaster CG12703-P...    30   2.7  

>AY118902-1|AAM50762.1|  665|Drosophila melanogaster LD11581p
           protein.
          Length = 665

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -2

Query: 590 ALVMIGNRV*-MCVVSKKTITQVPALSRGITQFVTILLKVLRLRPNLSIMI**YVFIKYN 414
           A  +IG  V  + ++   T+ +   +    T+F T LLK L   P +S++      +K++
Sbjct: 94  AAALIGRSVSDIWMIQNATVVESTIIHMNRTKFKTALLKYLTALPAISVVT---NVLKWS 150

Query: 413 LNKLKIQSTTSM-EDIHGSYLS 351
           L +LK++  T++   ++  YL+
Sbjct: 151 LGELKLRFRTNLTHHLYSQYLN 172


>AE014298-2935|AAF49018.2|  665|Drosophila melanogaster CG12703-PA
           protein.
          Length = 665

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -2

Query: 590 ALVMIGNRV*-MCVVSKKTITQVPALSRGITQFVTILLKVLRLRPNLSIMI**YVFIKYN 414
           A  +IG  V  + ++   T+ +   +    T+F T LLK L   P +S++      +K++
Sbjct: 94  AAALIGRSVSDIWMIQNATVVESTIIHMNRTKFKTALLKYLTALPAISVVT---NVLKWS 150

Query: 413 LNKLKIQSTTSM-EDIHGSYLS 351
           L +LK++  T++   ++  YL+
Sbjct: 151 LGELKLRFRTNLTHHLYSQYLN 172


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,679,565
Number of Sequences: 53049
Number of extensions: 601915
Number of successful extensions: 1210
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)