Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30141
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   105   4e-23
AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   105   8e-23
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   105   8e-23
AY752584-1|AAW32030.1|  167|Drosophila melanogaster CG11942 prot...    30   3.5  
AY752583-1|AAW32029.1|  167|Drosophila melanogaster CG11942 prot...    30   3.5  
AY752582-1|AAW32028.1|  167|Drosophila melanogaster CG11942 prot...    30   3.5  
AY752580-1|AAW32026.1|  167|Drosophila melanogaster CG11942 prot...    30   3.5  
AE014296-3725|AAO41287.1|  234|Drosophila melanogaster CG33169-P...    30   3.5  
AY944325-1|AAY33995.1|  418|Drosophila melanogaster rhino protein.     29   8.1  
AY118279-1|AAM48308.1|  427|Drosophila melanogaster AT13296p pro...    29   8.1  
AY069159-1|AAL39304.1|  440|Drosophila melanogaster GH18255p pro...    29   8.1  
AE014297-798|AAS65126.1|  427|Drosophila melanogaster CG8136-PC,...    29   8.1  
AE014297-797|AAN13398.1|  440|Drosophila melanogaster CG8136-PA,...    29   8.1  
AE014297-796|AAF54275.2|  441|Drosophila melanogaster CG8136-PB,...    29   8.1  
AE013599-3829|AAF47173.2|  317|Drosophila melanogaster CG12240-P...    29   8.1  

>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  105 bits (253), Expect = 4e-23
 Identities = 51/84 (60%), Positives = 61/84 (72%)
 Frame = +3

Query: 255 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 434
           VP+K+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L
Sbjct: 60  VPIKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 119

Query: 435 PSGLLLVTGPFAFNSCPLRRIPQR 506
            SGLLLVTGPFA NSCPLRR+ QR
Sbjct: 120 ASGLLLVTGPFALNSCPLRRVSQR 143



 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 28/78 (35%), Positives = 38/78 (48%)
 Frame = +2

Query: 464 FCFQFVPATPYSSALVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 643
           F     P    S   VIGTS+++ LG FK+P+H ND YF                 DIFA
Sbjct: 130 FALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA---DIFA 186

Query: 644 TKKEKYVPLSSAKPIRRQ 697
            KKE++VP    K  +++
Sbjct: 187 AKKERFVPNEQRKKDQKE 204


>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  105 bits (251), Expect = 8e-23
 Identities = 52/88 (59%), Positives = 62/88 (70%)
 Frame = +3

Query: 243 GNQNVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 422
           G + V LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL
Sbjct: 75  GERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVL 134

Query: 423 VGILPSGLLLVTGPFAFNSCPLRRIPQR 506
           + +L SGLLLVTGPFA NSCPLRR+ QR
Sbjct: 135 LKVLASGLLLVTGPFALNSCPLRRVSQR 162



 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 28/78 (35%), Positives = 38/78 (48%)
 Frame = +2

Query: 464 FCFQFVPATPYSSALVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 643
           F     P    S   VIGTS+++ LG FK+P+H ND YF                 DIFA
Sbjct: 149 FALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA---DIFA 205

Query: 644 TKKEKYVPLSSAKPIRRQ 697
            KKE++VP    K  +++
Sbjct: 206 AKKERFVPNEQRKKDQKE 223



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = +1

Query: 88  NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRT 255
           N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RT
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERT 78


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  105 bits (251), Expect = 8e-23
 Identities = 52/88 (59%), Positives = 62/88 (70%)
 Frame = +3

Query: 243 GNQNVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 422
           G + V LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL
Sbjct: 75  GERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVL 134

Query: 423 VGILPSGLLLVTGPFAFNSCPLRRIPQR 506
           + +L SGLLLVTGPFA NSCPLRR+ QR
Sbjct: 135 LKVLASGLLLVTGPFALNSCPLRRVSQR 162



 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 28/78 (35%), Positives = 38/78 (48%)
 Frame = +2

Query: 464 FCFQFVPATPYSSALVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 643
           F     P    S   VIGTS+++ LG FK+P+H ND YF                 DIFA
Sbjct: 149 FALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA---DIFA 205

Query: 644 TKKEKYVPLSSAKPIRRQ 697
            KKE++VP    K  +++
Sbjct: 206 AKKERFVPNEQRKKDQKE 223



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = +1

Query: 88  NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRT 255
           N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RT
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERT 78


>AY752584-1|AAW32030.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 484 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPD 311
           G ELK + P  +T    +  +  STTLL   L A+++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 310 EAR 302
           E R
Sbjct: 136 EIR 138


>AY752583-1|AAW32029.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 484 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPD 311
           G ELK + P  +T    +  +  STTLL   L A+++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 310 EAR 302
           E R
Sbjct: 136 EIR 138


>AY752582-1|AAW32028.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 484 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPD 311
           G ELK + P  +T    +  +  STTLL   L A+++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 310 EAR 302
           E R
Sbjct: 136 EIR 138


>AY752580-1|AAW32026.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 484 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPD 311
           G ELK + P  +T    +  +  STTLL   L A+++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 310 EAR 302
           E R
Sbjct: 136 EIR 138


>AE014296-3725|AAO41287.1|  234|Drosophila melanogaster CG33169-PB,
           isoform B protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +2

Query: 416 CTCWNSAQRSAFSYWTFCFQFVPATPYSSALV--IGTSTRISLGNFKLPKHFN 568
           C    +A  + F +W FC QF+ A    S  +  +    R  +   +LP H N
Sbjct: 105 CILEKAASTNMFYFWPFCVQFLIAIALVSVSLTPVHRGARRRVSQIRLPNHTN 157


>AY944325-1|AAY33995.1|  418|Drosophila melanogaster rhino protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = -1

Query: 515 RSLALRNTA*RARIESKRSSN*KQTAG--QNSNKYNPLACMSTSEENANSSYLQVGSDPA 342
           +S+  +NTA  ++++ K+  N K+TAG  ++   Y      STS+ + +S+ +  G+  A
Sbjct: 117 KSVQAKNTAGMSKMDQKKGKNIKKTAGKIKDIENYPKTQMPSTSQVSTDSTEVFDGNPSA 176


>AY118279-1|AAM48308.1|  427|Drosophila melanogaster AT13296p
           protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 513 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 659
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 92  SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 137


>AY069159-1|AAL39304.1|  440|Drosophila melanogaster GH18255p
           protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 513 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 659
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 105 SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 150


>AE014297-798|AAS65126.1|  427|Drosophila melanogaster CG8136-PC,
           isoform C protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 513 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 659
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 92  SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 137


>AE014297-797|AAN13398.1|  440|Drosophila melanogaster CG8136-PA,
           isoform A protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 513 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 659
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 105 SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 150


>AE014297-796|AAF54275.2|  441|Drosophila melanogaster CG8136-PB,
           isoform B protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 513 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRN 659
           S P  +  +AT NCQ   ++      ++ASN Q    ++  SLPQ+  N
Sbjct: 106 SLPEAKGCTATENCQ---LLAQEAETKNASNEQGGLGKMSVSLPQQNWN 151


>AE013599-3829|AAF47173.2|  317|Drosophila melanogaster CG12240-PB,
           isoform B protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 561 TSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFL*AAQNRSEDSRR 704
           T+   TSR  R+ SN + NAK+      Q KR     + +NR  +SRR
Sbjct: 271 TTASSTSRSSRTRSNRKLNAKKTQAKRSQAKR-----SGKNRKSNSRR 313


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,318,617
Number of Sequences: 53049
Number of extensions: 626394
Number of successful extensions: 1879
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1876
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)