Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30140X
(301 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces... 28 0.34
SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein P... 27 0.59
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 1.4
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 1.8
SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner me... 25 2.4
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 25 3.1
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 25 3.1
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce... 24 4.2
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 24 4.2
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 24 5.5
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 24 5.5
SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces po... 24 5.5
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 24 5.5
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 24 5.5
SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4 |Schi... 24 5.5
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 23 7.3
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 23 7.3
SPAC3C7.07c |||arginine-tRNA protein transferase |Schizosaccharo... 23 7.3
SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1 |Schiz... 23 7.3
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 23 7.3
SPBC1718.02 |hop1||linear element associated protein Hop1|Schizo... 23 9.6
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 23 9.6
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 23 9.6
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 23 9.6
>SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 419
Score = 27.9 bits (59), Expect = 0.34
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 283 FLWISYYNICNFCTASFDAAGGKLGHSAAPVRSKPESMR 167
F+WI + + C+ GG LGH A VR + S +
Sbjct: 88 FIWILIFIVALICSVLIGVLGGVLGHRTA-VRDRHPSYK 125
>SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein
Pvg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 389
Score = 27.1 bits (57), Expect = 0.59
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 252 IFVLPLSMQPEVSLATPLHQFDLS 181
IF+ P S+Q + +ATP H F LS
Sbjct: 242 IFMAPKSLQYDFMIATPKHPFVLS 265
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 1.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -2
Query: 261 TSVIFVLPLSMQPEVSLAT-----PLHQFDLSQNL*EILQNVRDDLVVPHH 124
T + +LP M+ E ++ + L + L+ L EI Q +R VVPHH
Sbjct: 77 TPIEEMLPSQMELETAVKSCMTMEQLELYSLNVRLEEITQKLRTGDVVPHH 127
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.4 bits (53), Expect = 1.8
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -1
Query: 277 WISYYNICNFCTASFDAAGGKLGHSAAPV 191
W YY+ N CT FD K + P+
Sbjct: 404 WFGYYSCNNPCTLFFDCGLHKCSKTCHPI 432
>SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner
membrane translocase Oxa102|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 2.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 58 FVPHSILEKWLVILKKWVGENW 123
F+PH+IL+ L L W G W
Sbjct: 94 FLPHNILQNGLNTLHIWSGLPW 115
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 24.6 bits (51), Expect = 3.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 52 IIFVPHSILEKWLVILKKW 108
++ VPH+ + W LKKW
Sbjct: 608 LVIVPHATVANWERELKKW 626
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 24.6 bits (51), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 224 GCIERGSTKITDVVIGNPKEGC 289
GC + G+T+ TD+ G E C
Sbjct: 538 GCYQIGTTQYTDLDFGPASEAC 559
>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1297
Score = 24.2 bits (50), Expect = 4.2
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -2
Query: 252 IFVLPLSMQPEVSLATPLHQFDLSQNL*EILQNVRDDLVVPHHPILSNPFLQNNQPFL 79
+F S+ + SL P ++N+ ++ + L V HP L L NQPFL
Sbjct: 726 LFYFDNSLPEDQSLLFPASLKRSAKNIFDLAYQLNGILPV-FHPQLLQQLLLRNQPFL 782
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 52 IIFVPHSILEKWLVILKKWVGEN 120
II P S+++ W L KW+G++
Sbjct: 327 IITCPSSLVKNWANELVKWLGKD 349
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 23.8 bits (49), Expect = 5.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 64 PHSILEKWLVILKKWVGENWVMGNNQIISYILQDF 168
P S +K ++I G+ +++ N +IIS ++DF
Sbjct: 287 PDSSFDKIMMISYMIDGQGFLITNREIISQNIEDF 321
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 23.8 bits (49), Expect = 5.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 168 EILQNVRDDLVVPHHPILS 112
+ L N +DDL VP P+L+
Sbjct: 619 DFLNNSKDDLPVPKSPLLT 637
>SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 521
Score = 23.8 bits (49), Expect = 5.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 286 PFLWISYYNICNF 248
P+ W++YYN+ F
Sbjct: 89 PYTWLTYYNVMAF 101
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 282 SFGFPITTSVIFVLPLSMQPEVSL 211
SFG P +S I P S P++ L
Sbjct: 364 SFGTPANSSFITTPPASFSPDIKL 387
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 168 LIDSGLDRTGAAEWPSLPPAASKEAV 245
LID G D G WP L P + +
Sbjct: 418 LIDGGSDSEGIPFWPLLHPQRDVDVI 443
>SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -1
Query: 250 FCTASFDAAGGKLGHSAAPVRSKP 179
+C F A HS APV S P
Sbjct: 173 WCVRRFSPASNSCCHSGAPVHSGP 196
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 23.4 bits (48), Expect = 7.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 52 IIFVPHSILEKWLVILKKW 108
+I VP S L W++ +KW
Sbjct: 922 LIIVPLSTLTNWIMEFEKW 940
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 23.4 bits (48), Expect = 7.3
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -2
Query: 213 LATPLHQFDLSQNL*EILQNVRDDLVVPHHPILSNPFLQNNQPFLKYGMWN 61
L ++ L +NL ++N +DDL V +L+ +N + + +W+
Sbjct: 277 LYNAVYLMGLKKNLLAFVENEKDDLFVAKIFLLAYSSSKNRKKIVPVDVWD 327
>SPAC3C7.07c |||arginine-tRNA protein transferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 9 TVNFA*SLHYSHFINNFRSTFHT*EMAGYFEEM 107
+VN A SL +F N STF T + YF ++
Sbjct: 304 SVNVAESLVSENFANIGNSTFPTRHVLSYFPQV 336
>SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 23.4 bits (48), Expect = 7.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 92 TSHFSSMECGTKIIYK 45
TSHF ++ C + IYK
Sbjct: 407 TSHFETLTCDVRDIYK 422
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 23.4 bits (48), Expect = 7.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 141 LVVPHHPILSNPFLQN 94
+VV HHPI+S+ L N
Sbjct: 437 VVVDHHPIISSTQLSN 452
>SPBC1718.02 |hop1||linear element associated protein
Hop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 108 GWRELGDGEQPNHLLHFARFLIDS 179
G+ D QPN LL + L+DS
Sbjct: 364 GFESDSDPRQPNQLLCYTCLLVDS 387
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 149 LTFCKISHRFWLRSNWCSGV 208
LT C I+ R+W N C+ +
Sbjct: 181 LTTCAITFRYWTDINSCAWI 200
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 85 WLVILKKWVGEN 120
WL +LKKW EN
Sbjct: 436 WLKLLKKWFVEN 447
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 140 WLFPITQFSPTHFFKITSHFSSMEC 66
+LF + +++P H +T HF+ C
Sbjct: 206 FLFHLDEYTPDHPIFLTMHFAFHGC 230
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,475,650
Number of Sequences: 5004
Number of extensions: 30257
Number of successful extensions: 93
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 73700136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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