Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30137X
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.77
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.77
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.77
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 30 1.3
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 30 1.3
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 30 1.3
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 30 1.3
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 30 1.3
Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical p... 29 1.8
AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog prote... 29 1.8
AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog (hedg... 29 1.8
Z82084-6|CAJ85781.1| 156|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81473-8|CAB03899.2| 418|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z68132-1|CAA92221.2| 374|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL031636-1|CAA21046.2| 418|Caenorhabditis elegans Hypothetical ... 27 9.5
AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical ... 27 9.5
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 143 PDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVVCVEATVTRTLTAN 295
PD + ++N T N +RSE G + ++D + ++V C + T + T+N
Sbjct: 4168 PDVSCSFNGVTDNSKIRSEDGIVLIQVNDVTEEGIVVECTISNETGSSTSN 4218
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 143 PDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVVCVEATVTRTLTAN 295
PD + ++N T N +RSE G + ++D + ++V C + T + T+N
Sbjct: 4168 PDVSCSFNGVTDNSKIRSEDGIVLIQVNDVTEEGIVVECTISNETGSSTSN 4218
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 143 PDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVVCVEATVTRTLTAN 295
PD + ++N T N +RSE G + ++D + ++V C + T + T+N
Sbjct: 4168 PDVSCSFNGVTDNSKIRSEDGIVLIQVNDVTEEGIVVECTISNETGSSTSN 4218
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Frame = +2
Query: 119 VRSEFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVVCVEATVTR---TLT 289
+R++ DA+ D + + N ++ LK + D+ ++ V + +++ T+T
Sbjct: 548 LRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVT 607
Query: 290 ---ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 403
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 608 LQRAVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Frame = +2
Query: 119 VRSEFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVVCVEATVTR---TLT 289
+R++ DA+ D + + N ++ LK + D+ ++ V + +++ T+T
Sbjct: 548 LRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVT 607
Query: 290 ---ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 403
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 608 LQRAVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Frame = +2
Query: 119 VRSEFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVVCVEATVTR---TLT 289
+R++ DA+ D + + N ++ LK + D+ ++ V + +++ T+T
Sbjct: 548 LRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVT 607
Query: 290 ---ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 403
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 608 LQRAVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Frame = +2
Query: 119 VRSEFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVVCVEATVTR---TLT 289
+R++ DA+ D + + N ++ LK + D+ ++ V + +++ T+T
Sbjct: 548 LRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVT 607
Query: 290 ---ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 403
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 608 LQRAVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 10 QQERAKTIKNEIDHRCSSRPCGYRHRCPPY-RGLP*DRSV*IRRQPRWSLQLQFRDFQRH 186
Q ER K +KN++ +R SSR G H+ P + R LP D R+ R + Q +F+ +
Sbjct: 2525 QLER-KFLKNKVHNRRSSRAPGIHHQRPLHPRWLPTDHET-DRKDSRAASQFRFQHMRSK 2582
Query: 187 R 189
R
Sbjct: 2583 R 2583
>Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical
protein F49E12.9a protein.
Length = 269
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 448 WIFATQSCIKASLLKSIQGI*KFSSWRRRPEE*IHPE 338
WI T S + KSI+G + SW +P + IHPE
Sbjct: 232 WIHGTDSTFR----KSIEGKRNYMSWSMKPIKQIHPE 264
>AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog protein
WRT-5 protein.
Length = 176
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 215 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 105
PS H+ +YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 5, isoform a protein.
Length = 176
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 215 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 105
PS H+ +YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>Z82084-6|CAJ85781.1| 156|Caenorhabditis elegans Hypothetical
protein ZK1053.7 protein.
Length = 156
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 247 YCCVRGSYSYTNTDGKPETITYF 315
Y ++ +YSY N DG P + TY+
Sbjct: 109 YDIIKDTYSYDNVDGTPISCTYY 131
>Z81473-8|CAB03899.2| 418|Caenorhabditis elegans Hypothetical
protein Y47H9A.1 protein.
Length = 418
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 229 RQQASRYCCVRGSYSYTNTDG 291
R A +Y VRG YS+TN DG
Sbjct: 82 RYFAFKYEIVRGKYSHTNKDG 102
>Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical
protein C17D12.3 protein.
Length = 463
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 229 RQQASRYCCVRGSYSYTNTDG 291
R A +Y VRG YS+TN DG
Sbjct: 82 RYFAFKYEIVRGKYSHTNKDG 102
>Z68132-1|CAA92221.2| 374|Caenorhabditis elegans Hypothetical
protein F09C8.1 protein.
Length = 374
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 433 VWRRSTTFSCYSLLI*CSLPYFFVRFFYYLLCFQYVMHKDNKV 561
+WRR FSC L + +LP F + + C VM K KV
Sbjct: 1 MWRRVFVFSCIFLYVLATLPDFGIPGY---SCDANVMKKSKKV 40
>AL031636-1|CAA21046.2| 418|Caenorhabditis elegans Hypothetical
protein Y47H9A.1 protein.
Length = 418
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 229 RQQASRYCCVRGSYSYTNTDG 291
R A +Y VRG YS+TN DG
Sbjct: 82 RYFAFKYEIVRGKYSHTNKDG 102
>AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical
protein C24D10.1 protein.
Length = 482
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 191 RSETGELKEALDDDNKPHVIVVCVEATVTRTLTA 292
R + + K+ ++DD P I V TVT T+ A
Sbjct: 86 REQLSDQKKTVEDDPPPAPIATSVSGTVTSTVNA 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,637,727
Number of Sequences: 27780
Number of extensions: 252203
Number of successful extensions: 859
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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