Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30136X
(465 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 109 2e-23
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 95 5e-19
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 90 3e-17
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 90 3e-17
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 89 6e-17
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 86 3e-16
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 85 9e-16
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 82 5e-15
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 82 7e-15
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 81 2e-14
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 72 5e-12
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 72 7e-12
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 72 7e-12
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 62 4e-09
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 45 7e-04
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 45 7e-04
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 44 0.002
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 37 0.19
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 37 0.19
UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.57
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 35 0.76
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 33 2.3
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 33 2.3
UniRef50_Q1HIU5 Cluster: Ankyrin repeat BTB/POZ domain-containin... 33 4.1
UniRef50_Q9N4S1 Cluster: Putative uncharacterized protein; n=4; ... 32 5.4
UniRef50_Q0F1Q5 Cluster: MobA/MobL protein; n=1; Mariprofundus f... 32 7.1
UniRef50_UPI000155C002 Cluster: PREDICTED: similar to Mrs2l prot... 31 9.4
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ... 31 9.4
UniRef50_Q9M9U6 Cluster: F6A14.14 protein; n=5; Arabidopsis thal... 31 9.4
UniRef50_Q9U4H9 Cluster: CES-1; n=3; Caenorhabditis|Rep: CES-1 -... 31 9.4
UniRef50_Q2H2H8 Cluster: Predicted protein; n=1; Chaetomium glob... 31 9.4
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 109 bits (263), Expect = 2e-23
Identities = 70/159 (44%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Frame = +2
Query: 2 MGIDINHKHDRKVRRTEVKSQDI-LEVTCKALQILGQTYKCQIQSDRSTPALYEPYQPGT 178
MG+DI H DRKVRR E KSQDI L + K + L + + S + L + T
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLAR----RTNSTFNQVVLKRLFMSRT 56
Query: 179 NLC-VSFGAPHEEANS*GFDCRGS---GDITNDVRLYKIPKMTVAALHVTAKARARILAA 346
N +S + G + + + G IT+DVR+ ++PK+ V AL VT++AR+RIL A
Sbjct: 57 NRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRA 116
Query: 347 GGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPA 463
GG+ILTFDQLAL +P G TVL+ G R RE RHFG A
Sbjct: 117 GGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKA 155
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGT 254
TN+ FNQ+VL+RLFMSR NR P+S+SR+ R MK P E AVVVGT
Sbjct: 39 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGT 85
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 95.5 bits (227), Expect = 5e-19
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
G +T+D R+++ PK TVAAL TA ARA+I+ AGGE +T DQLA+RAP G+ T++++G R
Sbjct: 85 GTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPR 144
Query: 428 NAREAVRHFG 457
N+REAVRHFG
Sbjct: 145 NSREAVRHFG 154
Score = 54.4 bits (125), Expect = 1e-06
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGT 254
T+A FN++VL+ LF+S+INR P+SVSR+AR +K+ VVVGT
Sbjct: 40 TDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVGT 86
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 89.8 bits (213), Expect = 3e-17
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
GD+ +DVR+ +IP M V AL + AR I+AAGGE LTFDQLA+ APTGK T L++G++
Sbjct: 91 GDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRK 150
Query: 428 NAREAVRHFG 457
+ RE+VRHFG
Sbjct: 151 SGRESVRHFG 160
Score = 41.1 bits (92), Expect = 0.012
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKK 215
T++ FN++V +RL SR NRAPIS+SR+A MK+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKR 73
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 89.8 bits (213), Expect = 3e-17
Identities = 44/72 (61%), Positives = 54/72 (75%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
G +T+D+R+Y +P + V AL T ARARI AGGE LTFDQLALR P TVL++G +
Sbjct: 80 GAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPK 138
Query: 428 NAREAVRHFGPA 463
NAREAV+HFGPA
Sbjct: 139 NAREAVKHFGPA 150
Score = 52.4 bits (120), Expect = 5e-06
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVG 251
T++ FN ++L+RLFMS++NR P+S+SRL ++M+ EG I VVVG
Sbjct: 37 TDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQ--GKEGKIGVVVG 80
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 88.6 bits (210), Expect = 6e-17
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
G +TND R+ +PK++V AL VT AR RILA+GGE+LTFDQL R+PTG + L++G
Sbjct: 83 GTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGAT 142
Query: 428 NAREAVRHF 454
AREAV+HF
Sbjct: 143 KAREAVKHF 151
Score = 45.6 bits (103), Expect = 5e-04
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGT 254
T+ FN++VL+RL M R +AP+S+S+L++HM+K AVVVGT
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEKRPDN--TAVVVGT 84
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 86.2 bits (204), Expect = 3e-16
Identities = 39/67 (58%), Positives = 55/67 (82%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
G IT+DVR++K+PK+ + AL VTA+ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG +
Sbjct: 54 GCITDDVRIHKLPKLKICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFK 113
Query: 428 NAREAVR 448
+ + R
Sbjct: 114 SETDMER 120
Score = 59.3 bits (137), Expect = 4e-08
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVG 251
TNAKFN IVL+RLFMSR N+A +S++R+ R M K EG AVVVG
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVG 54
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 84.6 bits (200), Expect = 9e-16
Identities = 40/68 (58%), Positives = 51/68 (75%)
Frame = +2
Query: 254 ITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNA 433
+T D R Y +PKM V AL T A A I AGG+ L FD+LAL+APTG+KTVL++G+RN
Sbjct: 84 VTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRKTVLIRGKRNV 142
Query: 434 REAVRHFG 457
REA++HFG
Sbjct: 143 REALKHFG 150
Score = 38.3 bits (85), Expect = 0.081
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAV 242
T +KF + +L RL +SR+NR +S S+LA MKK E + V
Sbjct: 39 TQSKFAKTILHRLCLSRVNRPIVSTSKLACLMKKHPEETAVCV 81
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 82.2 bits (194), Expect = 5e-15
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
G +T+D RL +PK+ V AL T AR RILAAGG+ LTFDQLA + PTG T+L++G +
Sbjct: 300 GTVTDDARLLTVPKLNVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK 359
Query: 428 NAREAVRHFGPA 463
REA++HFG A
Sbjct: 360 -VREALKHFGRA 370
Score = 40.7 bits (91), Expect = 0.015
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGT 254
T+++FN VLRRL +R R PISVSRL + + + VVVGT
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGT 301
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 81.8 bits (193), Expect = 7e-15
Identities = 41/72 (56%), Positives = 48/72 (66%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
G IT+D RL+ M V AL T AR RI+ AGGE LTFDQLALR PTGK +L++G
Sbjct: 139 GSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPT 198
Query: 428 NAREAVRHFGPA 463
AR A +HFG A
Sbjct: 199 KARTAEKHFGSA 210
Score = 39.9 bits (89), Expect = 0.027
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGT 254
T+ FN+I+ +RL M + R P+S+S+L +HM + +AVVVG+
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMS--NNQNSVAVVVGS 140
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = +2
Query: 260 NDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 439
+D R+ +PK++V AL VT AR RILA+GGE+LTFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 440 AVRHF 454
AV+HF
Sbjct: 185 AVKHF 189
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGTSQMT 266
T+ FN+IVL+RL M R +AP+S+S+L++HM+ + AVV+GT T
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTST 88
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 72.1 bits (169), Expect = 5e-12
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
G +T+DVRL +PK+ V T AR RILAAGG+ LTFDQLA + PTG T+L++G R
Sbjct: 380 GTVTDDVRLLTVPKIKV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR 435
Query: 428 NAREAVRHFGPA 463
RE ++HFG A
Sbjct: 436 -VREELKHFGRA 446
Score = 40.7 bits (91), Expect = 0.015
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGT 254
T++ FN VLRRL +R R PISVSRL + + + VVVGT
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGT 381
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 71.7 bits (168), Expect = 7e-12
Identities = 33/68 (48%), Positives = 45/68 (66%)
Frame = +2
Query: 254 ITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNA 433
+TND RL IP+MT+ AL +A AR+RI AGG ++FD+L PTG VL+QG+R+
Sbjct: 85 VTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEKPTGDNCVLLQGRRSC 144
Query: 434 REAVRHFG 457
R + FG
Sbjct: 145 RAVCKKFG 152
Score = 35.9 bits (79), Expect = 0.43
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGT 254
T F +++ +RL +S+ NR +SVSRLA M K E IAVV T
Sbjct: 40 TGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLMHK--REDKIAVVAST 84
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 71.7 bits (168), Expect = 7e-12
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
G IT+DV + ++PK+ V AL VT++AR+ I+ GG+ LTFDQLAL +P TVL+ G R
Sbjct: 120 GTITDDVWVQEVPKLKVCALGVTSRARSHIVRVGGKNLTFDQLALDSPKVCSTVLLSGPR 179
Query: 428 NAREAVRHFGPA 463
RE HF A
Sbjct: 180 KGREVYWHFDKA 191
Score = 31.5 bits (68), Expect = 9.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 168 NRAPISVSRLARHMKKPTXEGLIAVVVGT 254
N+ P+S+SR+ MK P E AVVVGT
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGT 121
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 62.5 bits (145), Expect = 4e-09
Identities = 29/61 (47%), Positives = 45/61 (73%)
Frame = +2
Query: 248 GDITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
G +T+++R+ +PK+ V+AL VT+ AR+RIL A G+IL+FDQLA+ +P G + QG R
Sbjct: 72 GTVTDNIRIQDVPKLKVSALRVTSNARSRILKANGKILSFDQLAMTSPKGPQK-CYQGYR 130
Query: 428 N 430
+
Sbjct: 131 H 131
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 45.2 bits (102), Expect = 7e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGT 254
T +KFN + L+R FMS++N+ P+ +SRL R M +G I VV+G+
Sbjct: 40 TGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM--DGKKGKIVVVIGS 84
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 45.2 bits (102), Expect = 7e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRLARHMKKPTXEGLIAVVVGT 254
T +KFN + L+R FMS++N+ P+ +SRL R M +G I VV+G+
Sbjct: 40 TGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM--DGKKGKIVVVIGS 84
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = +3
Query: 114 TNAKFNQIVLRRLFMSRINRAPISVSRL 197
TN+ FN++VL+RLFMSR NR P+++SR+
Sbjct: 148 TNSSFNKVVLKRLFMSRTNRPPLALSRM 175
Score = 38.3 bits (85), Expect = 0.081
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 2 MGIDINHKHDRKVRRTEVKSQDI-LEVTCKALQILGQ 109
+G+DI H DRKVRR E KSQDI L + K + L +
Sbjct: 110 LGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLAR 146
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 37.1 bits (82), Expect = 0.19
Identities = 15/58 (25%), Positives = 34/58 (58%)
Frame = +2
Query: 254 ITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 427
I ND R+ K PK+ + AL+ ++ + +I+ GG+I +++ + K + ++G++
Sbjct: 109 ILNDERISKTPKLKIFALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 37.1 bits (82), Expect = 0.19
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 287 KMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLV 415
K+ VAA+ ++ KA +++ AGGE+LT +L + P G +V
Sbjct: 79 KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRGSGVRIV 121
>UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 350
Score = 35.5 bits (78), Expect = 0.57
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +2
Query: 104 GQTYKCQIQSDRSTPALYEPYQPGTNLCVSFGAPHEEANS*GFDCRGSGDITNDVRLYKI 283
G ++CQ++ R +P++ T+ CVS + S G IT + +
Sbjct: 223 GMLHRCQVKRTRVSPSVLHKSPTSTSGCVSSSIQMDSTGSCGVSVGREQSITTQLLPSDV 282
Query: 284 PKMTVAALHVTAKARARILA 343
++ VAA + + RAR LA
Sbjct: 283 WEVCVAAKNAEEEVRARALA 302
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 35.1 bits (77), Expect = 0.76
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +2
Query: 254 ITNDVRLYKIPKMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNA 433
+ +D + IP + V AL + + +I GG I T DQL P LV + +
Sbjct: 89 VLDDDEVMVIPAVKVVALQWSKGVKEKIERYGGTIGTLDQLFELCPNMDDICLVSTNKFS 148
Query: 434 REAVRHFGPA 463
R + + +GPA
Sbjct: 149 RRSAKFWGPA 158
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.5 bits (73), Expect = 2.3
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 293 TVAALHVTAKARARILAAGGEILTFDQLALRAPTGK 400
+VAA V+A AR++I AAGG ++T L P GK
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 33.5 bits (73), Expect = 2.3
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 287 KMTVAALHVTAKARARILAAGGEILTFDQLALRAPTGKKTVLV 415
K+T+ ++ A ++L++GG + F +L PTGK VL+
Sbjct: 83 KITLCPFGISGAAAEKVLSSGGRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_Q1HIU5 Cluster: Ankyrin repeat BTB/POZ domain-containing
protein; n=2; core eudicotyledons|Rep: Ankyrin repeat
BTB/POZ domain-containing protein - Populus trichocarpa
(Western balsam poplar) (Populus balsamiferasubsp.
trichocarpa)
Length = 679
Score = 32.7 bits (71), Expect = 4.1
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 394 SRSTKSQLIKSKNFSSSSQ---NACTSFCGNMKSSHRHLRYLVQSHVI-CDVPTTTAIK 230
S S+ S +K FSSS N FC N++ RH +LV HVI VP A+K
Sbjct: 596 SSSSSSSSLKDSKFSSSGSCFHNMSDLFCWNLEYKLRH-GFLVYRHVIGLPVPLVKAVK 653
>UniRef50_Q9N4S1 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 388
Score = 32.3 bits (70), Expect = 5.4
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3
Query: 430 ISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFCGNMKSSHRHLRY 281
++++LYQ L SR S + + +FSSSS N +C +S+R + Y
Sbjct: 340 VNISLYQVQRLVSRP--SATLANADFSSSSTNLVDDYCMRQSNSNRRMVY 387
>UniRef50_Q0F1Q5 Cluster: MobA/MobL protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: MobA/MobL protein - Mariprofundus
ferrooxydans PV-1
Length = 475
Score = 31.9 bits (69), Expect = 7.1
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -3
Query: 403 LLASRSTKSQLIKSKNFSSSSQNACTSFCGNMKSSHRHLRYLVQSHVICDVPTTT 239
+L TKSQ + K+ + +N + N++S+H+ L+ L Q H D+P +T
Sbjct: 413 MLEFEQTKSQ--QRKDELHTMKNRLSQISDNLRSTHQSLKLLQQKHPNIDMPKST 465
>UniRef50_UPI000155C002 Cluster: PREDICTED: similar to Mrs2l
protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to Mrs2l protein - Ornithorhynchus anatinus
Length = 198
Score = 31.5 bits (68), Expect = 9.4
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 162 RINRAPISVSRLARHMKKPTXEGLIAVVVGTSQMT*DCTRYRR*RWLLFMLPQKL 326
R +RAP + R RH ++PT L AV+ + D R+ RWL LP +L
Sbjct: 74 RWDRAPHA--RHVRHARRPTWRSLKAVIPPEYLLILDYRHLRQERWLFHDLPAQL 126
>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tethering factor SEC34 -
Strongylocentrotus purpuratus
Length = 781
Score = 31.5 bits (68), Expect = 9.4
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = -3
Query: 460 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFCGNMKSSHRHLRY 281
+A+ CL+ +LTL + + + +Q + K+ +S+S+NA T F G +S+ ++
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256
Query: 280 LVQ 272
L++
Sbjct: 257 LME 259
>UniRef50_Q9M9U6 Cluster: F6A14.14 protein; n=5; Arabidopsis
thaliana|Rep: F6A14.14 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 404
Score = 31.5 bits (68), Expect = 9.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 458 GQSDALPHEHFADLVPVLSSCQSEHEEPADQ 366
G S LPH +PV SSC E +P DQ
Sbjct: 238 GDSSFLPHREMDGSIPVYSSCFFESTKPEDQ 268
>UniRef50_Q9U4H9 Cluster: CES-1; n=3; Caenorhabditis|Rep: CES-1 -
Caenorhabditis briggsae
Length = 266
Score = 31.5 bits (68), Expect = 9.4
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 409 YCLLASRSTKSQLIKSKNFSSSSQNACT-SFCGNMKSSHRHLRYLVQSHVICDVP 248
Y L + +S + + KN SSSSQN C CG ++ +L Q+H D P
Sbjct: 104 YTLDSLQSIDRRSLNKKNLSSSSQNRCVCDKCGKSYATTSNLSRHKQTHRALDSP 158
>UniRef50_Q2H2H8 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 236
Score = 31.5 bits (68), Expect = 9.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 110 TYKCQIQSDRSTPALYEPYQPGTNLCVSFGAPHEEANS*GFDCRGSGDITN 262
T KCQ + S+ A + P PGT++ + E A G+ C G+ +T+
Sbjct: 71 TAKCQTRFSNSSAACHAPV-PGTSVSIDGTCGTEGAGKEGYRCPGNATVTS 120
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,847,849
Number of Sequences: 1657284
Number of extensions: 9266415
Number of successful extensions: 25421
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 24654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25395
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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