Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30136X
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.2  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   7.4  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   7.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   9.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   9.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 2   MGIDINHKHDRKV 40
           +G++INHK D +V
Sbjct: 407 LGLEINHKEDFRV 419


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 344 QPKCVHELL 318
           +P C+HELL
Sbjct: 355 EPDCIHELL 363


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
 Frame = -3

Query: 205 WRA-----KRDTEIGARLIRLIKSRRR 140
           WRA     KR TEI   LI  IKSR +
Sbjct: 537 WRAFLAVLKRRTEIYKGLIDRIKSREK 563


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -2

Query: 422 DLVPVLSSCQSEHEEPADQK*EFLLQQP 339
           +L+  L   Q+E+E P+++  + ++ QP
Sbjct: 317 ELIHRLVYFQNEYEHPSEEDVKRIINQP 344


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 310 CYRKSSCTHFGCWRRNSYF*SAGSSC 387
           CY       FG  +R S+F +  +SC
Sbjct: 150 CYSTYGIQVFGTMQRTSFFKTFLNSC 175


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 264 SFVMSPLPRQSNPXELASSCG 202
           S + +P P +    ELA  CG
Sbjct: 251 SHLSNPYPSEEAKEELARKCG 271


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 239 RGSGDITNDVRLYKIPKMTVAALHV 313
           R  G+     + Y IPK T+  +H+
Sbjct: 67  RALGEDVRTQKGYLIPKDTITIIHI 91


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 295 RHLRYLVQSHVICDVPTTTAIKP 227
           R LR +V     CDVP+T    P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPP 217


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = -2

Query: 233 QTLXSWLLHVARQTRHRDW 177
           QTL  WL H        DW
Sbjct: 658 QTLAMWLNHNPNYAEVTDW 676


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,557
Number of Sequences: 336
Number of extensions: 2195
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)