Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30136X
         (465 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           26   0.75 
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     26   0.75 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   3.0  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   5.3  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   6.9  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     22   9.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            22   9.2  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 25.8 bits (54), Expect = 0.75
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +2

Query: 17  NHKHDRKVRRTEVKSQDILEVTCKALQILGQTYKCQIQSDRSTPALYEPYQP 172
           N+K DR+V  +     +   VTC  LQ      +C+    ++  A Y P +P
Sbjct: 161 NNKADREVYESHRCKDEAGNVTCPVLQTF-VCMRCKATGTKAHTAKYCPLKP 211


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 25.8 bits (54), Expect = 0.75
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +2

Query: 17  NHKHDRKVRRTEVKSQDILEVTCKALQILGQTYKCQIQSDRSTPALYEPYQP 172
           N+K DR+V  +     +   VTC  LQ      +C+    ++  A Y P +P
Sbjct: 162 NNKADREVYESHRCKDEAGNVTCPVLQTF-VCMRCKATGTKAHTAKYCPLKP 212


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -3

Query: 400 LASRSTKSQLIKSKNFSSSSQNACTSFCGNMKSSHRHLRYL 278
           LA   T+  +I SK   S  +N   + CG    S R +RYL
Sbjct: 705 LAPEKTELLMISSKR--SGYRNIPVNICGVEVRSKRSIRYL 743


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 220 VGFFMWRAKRDTEIGARLIRLIKSRRRTI 134
           VG  +W +K   E   R +  IKS+RR +
Sbjct: 268 VGLELWGSKSIGECTQRQLDNIKSKRRVV 296


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 11  DINHKHDRKVRRTEVKSQDILEVTCKALQILGQTYK 118
           D  H    + + T    QDI+EVT    ++  Q YK
Sbjct: 227 DQQHGAQHRPQTTRPNRQDIIEVTSFTGKMWYQVYK 262


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -1

Query: 258 VMSPLPRQSNPXELASSCGAPNETQRLVPG*YGS*RAGVERSD*IWH 118
           V +PLP  S P  L      PN +Q    G   +  +G+ R    +H
Sbjct: 352 VTAPLPGPSPPSSLGMPGNIPNLSQLDATGGQSASTSGLPRGIYTYH 398


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 44  RTEVKSQDILEVTCKALQILGQTY 115
           RT+ +  D+  + CK L   G+TY
Sbjct: 698 RTQPRLMDLDSIYCKLLYNRGRTY 721


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,755
Number of Sequences: 2352
Number of extensions: 8882
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)